Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00565
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663...    32   0.60 
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284...    32   0.60 
01_05_0657 + 24034198-24036306                                         29   4.2  
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78...    28   9.8  
03_05_0682 - 26691973-26692623,26692681-26692788,26694741-266948...    28   9.8  

>07_01_0821 +
           6631942-6632144,6632155-6632680,6634264-6634619,
           6634683-6634877,6635419-6635623
          Length = 494

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 259 STILIELIHDDYTQDYYIRILYRNSTEIIEPSILNIPCCGAKCPFER 399
           S +L +L+H++      +      +T   E   L+IPC G KCP E+
Sbjct: 436 SKLLDKLVHEELRHQEQMNRKLSIATAAEEAKQLSIPCSGMKCPHEQ 482


>06_03_1130 -
           27826384-27827039,27827800-27828031,27828120-27828491,
           27829243-27829449,27829611-27829704,27829806-27829870,
           27829946-27830398,27830467-27830760,27830837-27831295,
           27831367-27831588,27831755-27831968,27832039-27832494,
           27833280-27833389,27833468-27833644,27833758-27833979,
           27834048-27834167,27834274-27834383,27834552-27834607,
           27835252-27835440,27835602-27835775,27836066-27836281,
           27837066-27837106,27837971-27837986,27838330-27838415,
           27838737-27838910,27839093-27839149,27839720-27840064,
           27840175-27840216,27840377-27840496,27840575-27840724,
           27840830-27841534,27841609-27841954,27842978-27843080,
           27844817-27844860,27845905-27846101,27846322-27846344,
           27846802-27847122,27847406-27847579,27847843-27848047,
           27848817-27848880,27850097-27850278,27850291-27850350,
           27850688-27850748,27851249-27851313,27851491-27851569,
           27851656-27852021,27852442-27852790,27852887-27852989,
           27853103-27853373,27854296-27854405,27854515-27854652
          Length = 3364

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 456 ISVRGDSCYVFHSWNGTFATIY 521
           ++VRGD  Y F++WN TF  IY
Sbjct: 18  VAVRGDDPYRFYTWNITFGDIY 39


>01_05_0657 + 24034198-24036306
          Length = 702

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = +1

Query: 235 RRKMSRFTSTILIEL--IHDDYTQDYYIRILYRNSTEIIEPSILNIPCCG--AKCPFERF 402
           ++ + R    I +EL  +HD +   Y++  +YR+   ++  S   IP CG  A   F+R 
Sbjct: 285 QKYVERAFRVIEVELAFVHDYFYTKYFVIYMYRHDDTVL--SCAMIPFCGWLAYMLFQRV 342

Query: 403 KTIYDNLISVKWDYECRQSQFVAILVMSFIVGMGLL 510
               D L  +    +   + F A++    I+G+ L+
Sbjct: 343 HVPNDELKLI----DDHNNNFDALITAVLIIGVALV 374


>12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-780281,
            780377-780571,780681-780788,780935-781156,781669-781986,
            781988-782615,783059-783135,783161-783267,783491-783619,
            783763-783820,783902-783984,784458-784539,784617-784693,
            784827-784910,784999-785068,785146-785234,785319-786008,
            786485-786797
          Length = 1410

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 611  GVTFGHCCHVKKDSRYVDTCELPSKCLGLF 700
            G +    CH+K+  R +D  E   KC G F
Sbjct: 1204 GSSVAKSCHLKRPMRLIDVLENFRKCFGTF 1233


>03_05_0682 -
           26691973-26692623,26692681-26692788,26694741-26694807,
           26695311-26695422,26695743-26695787,26696163-26696235,
           26696321-26696362
          Length = 365

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/65 (21%), Positives = 29/65 (44%)
 Frame = +1

Query: 277 LIHDDYTQDYYIRILYRNSTEIIEPSILNIPCCGAKCPFERFKTIYDNLISVKWDYECRQ 456
           L+ + YTQ   +  ++     ++        CC  +      + IYD L  ++ +YE  +
Sbjct: 243 LVDEFYTQTTQLSSIWCQLDSLVPDVCRTCKCCQRQRSHMDLRRIYDFLTRLRSEYESTR 302

Query: 457 SQFVA 471
           +Q +A
Sbjct: 303 AQLLA 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,162,811
Number of Sequences: 37544
Number of extensions: 432141
Number of successful extensions: 805
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)