Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00565
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41109-8|AAB37044.1|  344|Caenorhabditis elegans Hypothetical pr...    37   0.014
U00031-7|AAK18870.2|  422|Caenorhabditis elegans Hypothetical pr...    36   0.025
AF016688-5|AAB66073.1|  666|Caenorhabditis elegans Hypothetical ...    29   2.9  

>U41109-8|AAB37044.1|  344|Caenorhabditis elegans Hypothetical
           protein F52E1.8 protein.
          Length = 344

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 19/57 (33%), Positives = 34/57 (59%)
 Frame = +1

Query: 253 FTSTILIELIHDDYTQDYYIRILYRNSTEIIEPSILNIPCCGAKCPFERFKTIYDNL 423
           +T+T+L EL +DD T    +++ Y+N+T    P  + IP C   CP+ +F  + +N+
Sbjct: 275 YTATVLFEL-YDDNT----VQLFYKNTTSTAYP--MTIPGCQQICPYSQFLQLLENV 324


>U00031-7|AAK18870.2|  422|Caenorhabditis elegans Hypothetical
           protein B0361.7 protein.
          Length = 422

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = +1

Query: 250 RFTSTILIELIHDDYTQDYYIRILYRNSTEIIEPSILNIPCCGAKCPFERFKTIYDNLIS 429
           ++ + +LIE+ H    +   IR+ ++N T+I      +IP C   C  ++          
Sbjct: 298 KYATCLLIEM-HKLANETRLIRVFHKNETDIDRLIEYSIPGCDDPCTLQKLGDDLKKYFP 356

Query: 430 VKWDYEC---RQSQFVAILVMSFIV 495
             W+ EC      QF+ ++++S +V
Sbjct: 357 EDWEAECGLKTSFQFIYLVIISILV 381


>AF016688-5|AAB66073.1|  666|Caenorhabditis elegans Hypothetical
           protein F18A12.7 protein.
          Length = 666

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = +2

Query: 26  EPAGYSFKTETATPLLARLKVGPLMKIIVTSIQEVI 133
           EPA  S   ET    LA L  GPL   IV S  E+I
Sbjct: 86  EPANESLSNETFIFKLAELLEGPLKPFIVVSPDEII 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,567,501
Number of Sequences: 27780
Number of extensions: 396113
Number of successful extensions: 849
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)