Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00563
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    22   2.7  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   7.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.6  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    23   7.6  

>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 22.2 bits (45), Expect(2) = 2.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 258 RWWWRYLRG 232
           RWWW ++ G
Sbjct: 11  RWWWDFILG 19



 Score = 20.6 bits (41), Expect(2) = 2.7
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -3

Query: 261 SRWWWRY 241
           S WWWR+
Sbjct: 6   SCWWWRW 12


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 209 FTGAHRHLPRKYRHHH 256
           FT    H+ ++++HHH
Sbjct: 71  FTHEESHIDQRFQHHH 86


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 153 LCHHARSNLPAHSPPGVKCLPEPIDIYHVN 242
           LCH A  +  A S P  +  P P+ + H+N
Sbjct: 13  LCHLAIQDGAAKSFPHGEKAPFPLTLIHIN 42


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 153 LCHHARSNLPAHSPPGVKCLPEPIDIYHVN 242
           LCH A  +  A S P  +  P P+ + H+N
Sbjct: 13  LCHLAIQDGAAKSFPHGEKAPFPLTLIHIN 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,768
Number of Sequences: 2352
Number of extensions: 11013
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)