Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00562X
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.25 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.25 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   3.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   9.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 215 NNTFR*VERAFKNIFYKQTFLLKNIVYRYFV-VLGFIL 325
           NN  + ++   KN    +T LL+N+  ++FV V+ +IL
Sbjct: 111 NNNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 215 NNTFR*VERAFKNIFYKQTFLLKNIVYRYFV-VLGFIL 325
           NN  + ++   KN    +T LL+N+  ++FV V+ +IL
Sbjct: 111 NNNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 257 FYKQTFLLKNIVYRYFVVLGFILKYID 337
           FY   F L  I   Y   L  I KYID
Sbjct: 84  FYSYFFYLSYIYTTYSRKLSGIFKYID 110


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 257 FYKQTFLLKNIVYRYFVVLGFILKYID 337
           FY   F L  I   Y   L  I KYID
Sbjct: 40  FYSYFFYLSYIYTTYSRKLSGIFKYID 66


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 50  RVSRLSRVAAFTLLMSLGSG 109
           RVS L  +   TL+M LG+G
Sbjct: 734 RVSILRNIIVGTLMMVLGTG 753


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 290 QYF*VKMFVYKICF*TLFL 234
           QY+  + F Y +C  T+FL
Sbjct: 145 QYYIGRSFTYYVCNTTIFL 163


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  WALVNT*HREGHEITSCLIKNN 164
           ++ V   HR+GHEI    I +N
Sbjct: 240 YSAVQEMHRKGHEIAVHSITHN 261


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 268 LFIKYVFKRSFYL 230
           LF++YVF  S+ L
Sbjct: 136 LFVRYVFVTSYLL 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,596
Number of Sequences: 336
Number of extensions: 1581
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)