Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00562X
         (374 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0428 - 3379116-3379262,3379357-3379537,3379690-3379785,337...    28   2.7  
07_03_1210 + 24903389-24903695,24904383-24904468,24904545-249046...    27   6.3  

>05_01_0428 -
           3379116-3379262,3379357-3379537,3379690-3379785,
           3379886-3380034,3380120-3380392,3380895-3380983,
           3381923-3382015,3382143-3382238,3382370-3382477,
           3382917-3383208
          Length = 507

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 313 QYNKITIYNIFK*KCL 266
           QYN+I IYNI+  KCL
Sbjct: 284 QYNQIDIYNIYAPKCL 299


>07_03_1210 +
           24903389-24903695,24904383-24904468,24904545-24904649,
           24904737-24905531,24905719-24905941,24906318-24906712
          Length = 636

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -3

Query: 258 NMFLNALSTYL--KVLFSQLQLKNLIVVKNWYKNYFL 154
           N+  ++L  Y   +  FS  QLKNL + K+W K++++
Sbjct: 494 NISADSLQIYFPGENFFSVCQLKNLRISKDWVKSHWV 530


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,739,352
Number of Sequences: 37544
Number of extensions: 120903
Number of successful extensions: 207
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)