Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00562X
         (374 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   1.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   2.8  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   3.7  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   3.7  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   3.7  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   3.7  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 262 IKYVFKR--SFYLPESIIFSTSA*KSN 188
           +K+V +R  SF+  + +I ST A KSN
Sbjct: 130 LKHVLERTQSFFFEQEVIVSTDAAKSN 156


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 316  PQYNKITIYNIFK*KCLFIKYVFKRSFYLPESIIFSTSA*KSNC 185
            PQ  K++ + +    C F+KY F +   L +S++   +    NC
Sbjct: 917  PQRVKLSAHQLEMVNC-FVKYTFTKVLRLQKSLMLYDANATENC 959


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 364  NIFLLTNYKIDIFKDKPQYNKITIYN 287
            N+F L++Y + I+K K   + +TI N
Sbjct: 1250 NMFELSDYLVGIYKVKDCTDSVTIKN 1275


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 305 QNNDIQYF*VKMFVYKICF*TLFLPT*KYYFLN 207
           +N D  Y      +Y ICF TL +P   Y  LN
Sbjct: 90  ENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 305 QNNDIQYF*VKMFVYKICF*TLFLPT*KYYFLN 207
           +N D  Y      +Y ICF TL +P   Y  LN
Sbjct: 90  ENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 305 QNNDIQYF*VKMFVYKICF*TLFLPT*KYYFLN 207
           +N D  Y      +Y ICF TL +P   Y  LN
Sbjct: 90  ENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 305 QNNDIQYF*VKMFVYKICF*TLFLPT*KYYFLN 207
           +N D  Y      +Y ICF TL +P   Y  LN
Sbjct: 90  ENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,716
Number of Sequences: 2352
Number of extensions: 6105
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)