Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00560X
         (391 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WVZ6 Cluster: Intramembrane protease 5; n=14; Theria|...    34   1.1  
UniRef50_UPI00006CAFD5 Cluster: hypothetical protein TTHERM_0046...    32   3.4  
UniRef50_Q28QJ5 Cluster: Succinylglutamate desuccinylase/asparto...    31   6.0  
UniRef50_Q75EA6 Cluster: AAR171Wp; n=1; Eremothecium gossypii|Re...    31   7.9  

>UniRef50_Q8WVZ6 Cluster: Intramembrane protease 5; n=14;
           Theria|Rep: Intramembrane protease 5 - Homo sapiens
           (Human)
          Length = 684

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -2

Query: 288 LTSLLYILYNHTLYVIITLGRTGHGVTVHSCLS 190
           L  LLY  Y+H +YV I +   G G+ ++SCLS
Sbjct: 266 LMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLS 298


>UniRef50_UPI00006CAFD5 Cluster: hypothetical protein
           TTHERM_00469160; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00469160 - Tetrahymena
           thermophila SB210
          Length = 393

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 58  HSGVHDIRNWVKK-KEEKAVLDFNEYSYILQ 147
           H+ V DIRNW KK K+   +  FN  +YI+Q
Sbjct: 74  HASVRDIRNWKKKIKQMLQIKLFNSCNYIMQ 104


>UniRef50_Q28QJ5 Cluster: Succinylglutamate
           desuccinylase/aspartoacylase; n=2; Rhodobacteraceae|Rep:
           Succinylglutamate desuccinylase/aspartoacylase -
           Jannaschia sp. (strain CCS1)
          Length = 333

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +2

Query: 17  SGYVYIDDILVAGHTRVSMILETGXXXXXXXXSWISTSIVIFYNIQGPSLKISSGCTEDR 196
           SG +   D+ V  H +    L            WI   I +  N  GP+L IS+G   D 
Sbjct: 2   SGTLITSDVDVDAHGKQQAYLRVPHSVHRSAYGWIPVPIAVIRNGDGPTLVISAGVHGDE 61

Query: 197 QE 202
            E
Sbjct: 62  YE 63


>UniRef50_Q75EA6 Cluster: AAR171Wp; n=1; Eremothecium gossypii|Rep:
           AAR171Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 707

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 325 AYSIXVAGHSKPTHKLTLYIIQSYI-VCYNNT 233
           AYS  +A HS P  +  LYII  ++  CY+ T
Sbjct: 442 AYSADLASHSDPQERKNLYIINQWLEECYSKT 473


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,186,937
Number of Sequences: 1657284
Number of extensions: 7332194
Number of successful extensions: 18017
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18015
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)