Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00560X
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.32 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.32 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   1.7  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   5.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   5.2  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    22   9.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 390 SVKADKLPEEDPDIVKESELLLRIPSLWLVTPNLLTSLLYILYNHT 253
           +VK D   E  P + + SEL  R+PS+W +      +  ++ Y +T
Sbjct: 552 AVKMDSGSEHWPFMTERSELKDRLPSVWYLVRQFDRADQWMEYTYT 597


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 390 SVKADKLPEEDPDIVKESELLLRIPSLWLVTPNLLTSLLYILYNHT 253
           +VK D   E  P + + SEL  R+PS+W +      +  ++ Y +T
Sbjct: 553 AVKMDSGSEHWPFMTERSELKDRLPSVWYLVRQFDRADQWMEYTYT 598


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 62  ECDQLQVCRQCIRIHYNNI 6
           EC    VC+QC R H++ +
Sbjct: 389 ECRSTYVCQQCKRKHHSKL 407


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 113 SWISTSIVIFYNIQGPSLKISSGCTEDRQE 202
           +W+ TS  I + +Q     + SGC   + E
Sbjct: 45  NWVLTSSFIIFTMQTGFGMLESGCVSVKNE 74


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 52  WSHSGVHDIRNWVKKK 99
           W+H  V D+R W  +K
Sbjct: 904 WAHRQVPDVRLWTGRK 919


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 215 PCPVRPSVIITYNV 256
           PC   P + ITYNV
Sbjct: 224 PCCTEPYIDITYNV 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,667
Number of Sequences: 2352
Number of extensions: 8755
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)