Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00559X
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    26   0.22 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.39 
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +3

Query: 204 LLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 341
           +++  PL P  +    T   +K +T+P     +KP      P  PP
Sbjct: 155 VISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQAPP 200


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 117 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 212
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 86  PDPQIPHRTRNRH 124
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 155 MPNLLHVIPVSDDSVFD 105
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 155 MPNLLHVIPVSDDSVFD 105
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 155 MPNLLHVIPVSDDSVFD 105
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 155 MPNLLHVIPVSDDSVFD 105
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
 Frame = -2

Query: 447  SSRPAKSRR----TMAW--GSA--YPS*MXTVWETPSPESSTIP 340
            +++PA+S      T +W  GS   YP    T W  P P +S  P
Sbjct: 1342 TAKPAQSTTSVSTTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,489
Number of Sequences: 336
Number of extensions: 2387
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)