Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00559X
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 2e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 2e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 2e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 2e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 2e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 7e-41
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 154 5e-38
SB_54| Best HMM Match : Actin (HMM E-Value=0) 137 6e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 122 2e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 3e-26
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 4e-11
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 62 3e-10
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 1e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.059
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62) 31 0.41
SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019) 31 0.41
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 31 0.72
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 0.95
SB_49724| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 29 2.2
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 29 2.9
SB_25587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_55265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09) 27 6.7
SB_46598| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11) 27 6.7
SB_12097| Best HMM Match : Birna_VP5 (HMM E-Value=4.6) 27 6.7
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_41338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 8.9
SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1) 27 8.9
SB_21651| Best HMM Match : ETF_alpha (HMM E-Value=9.7) 27 8.9
SB_15033| Best HMM Match : Dynein_light (HMM E-Value=4) 27 8.9
SB_10353| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_8096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5141| Best HMM Match : Synaptobrevin (HMM E-Value=0.0092) 27 8.9
SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18) 27 8.9
SB_53169| Best HMM Match : DUF58 (HMM E-Value=3.2) 27 8.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 38 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
Score = 166 bits (404), Expect = 8e-42
Identities = 77/94 (81%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV IYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 172
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGYSFT+TA+
Sbjct: 173 PHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (459), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 37 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 96
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 97 APEEHPVLLTEAPLNPKANREKMTQ 121
Score = 165 bits (402), Expect = 1e-41
Identities = 77/94 (81%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV IYEGYAL
Sbjct: 112 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 171
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGYSFT+TA+
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (459), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 37 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 96
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 97 APEEHPVLLTEAPLNPKANREKMTQ 121
Score = 165 bits (402), Expect = 1e-41
Identities = 77/94 (81%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV IYEGYAL
Sbjct: 112 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 171
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGYSFT+TA+
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 205
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 38 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
Score = 165 bits (402), Expect = 1e-41
Identities = 77/94 (81%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV IYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 172
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGYSFT+TA+
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (459), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 38 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
Score = 96.7 bits (230), Expect = 1e-20
Identities = 47/61 (77%), Positives = 53/61 (86%), Gaps = 2/61 (3%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYE--GY 400
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTV IYE GY
Sbjct: 113 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGY 172
Query: 401 A 403
+
Sbjct: 173 S 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 163 bits (396), Expect = 7e-41
Identities = 75/86 (87%), Positives = 85/86 (98%)
Frame = +2
Query: 251 DQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVRLD 430
++IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV IYEGYALPHAI+RLD
Sbjct: 83 EKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 142
Query: 431 LAGRELTEYLMKILTERGYSFTSTAD 508
LAGR+LT+YLMKILTERGYSFT+TA+
Sbjct: 143 LAGRDLTDYLMKILTERGYSFTTTAE 168
Score = 113 bits (272), Expect = 8e-26
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 164
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 37 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 154 bits (373), Expect = 5e-38
Identities = 70/84 (83%), Positives = 80/84 (95%)
Frame = +2
Query: 257 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVRLDLA 436
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH V IYEGYALPHAI+RLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 437 GRELTEYLMKILTERGYSFTSTAD 508
GR+LT+YLMK++TERGYSFT+TA+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAE 84
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 137 bits (331), Expect = 6e-33
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +2
Query: 254 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVRLDL 433
Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTV +Y+GY LPHA R+DL
Sbjct: 2166 QLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDL 2225
Query: 434 AGRELTEYLMKILTERGYSFTSTAD 508
AGR+LT YL +++TERGYSF STA+
Sbjct: 2226 AGRDLTHYLQRLVTERGYSFQSTAE 2250
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 144 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPC 290
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M + + S PC
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFE-SFNVPC 2176
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 122 bits (294), Expect = 2e-28
Identities = 50/94 (53%), Positives = 78/94 (82%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+V IYEG+A+
Sbjct: 138 PRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAM 197
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PH+I+R D+AGR+++ YL +L + G+ F S+++
Sbjct: 198 PHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSE 231
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 192 EHPVLLTEAPLNPKANREK 248
+HPVLLTEAPLNP+ NREK
Sbjct: 126 QHPVLLTEAPLNPRRNREK 144
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 114 bits (275), Expect = 3e-26
Identities = 49/94 (52%), Positives = 70/94 (74%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P + + ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H +YEG+AL
Sbjct: 116 PMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFAL 175
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PH RLD+AGR++T+YL+K++ RGY+F TAD
Sbjct: 176 PHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTAD 209
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 42 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 218
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 219 PLNPKANREKM 251
PLNP NREKM
Sbjct: 113 PLNPMKNREKM 123
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = +2
Query: 254 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVRLDL 433
++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG + V +++GY L AIVR L
Sbjct: 54 ELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
Query: 434 AGRELTEYLMKILTE 478
AG +T ++ E
Sbjct: 114 AGDFITAQCRQMFEE 128
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 102 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 254
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLT 53
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 QAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVRLDLAGRELTEYLMKIL-TE 478
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LTE L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 479 RGYSFTSTA 505
RG++FTS++
Sbjct: 827 RGHNFTSSS 835
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 30 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 209
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 338 TGIVLDSGDGVSHTVXI 388
TG V+DSGDGV+H + +
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 248 DDQIMFETFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVXIYEGYALPHAIVR 424
D+ I ++ T A+ + S RT TG V+DSGDGV+H + + EGY + I
Sbjct: 31 DEAIDKPSYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKH 90
Query: 425 LDLAGRELTEYLMKILTER 481
+ +AGR++T ++ ++L ER
Sbjct: 91 IPIAGRDITFFVQQLLRER 109
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.059
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 51 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 173
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +2
Query: 230 QGQQREDDQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVXIY 391
+G + D+I+FE +N A+ A LS Y S +V+D+G +H V ++
Sbjct: 315 EGLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVF 374
Query: 392 EGYALPHAIVR 424
G + A+ R
Sbjct: 375 NGKVIKKAVRR 385
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 438 PAKSRRTMAWGSAYPS*MXTVWETPSPESSTIPVVRPDAYSESTAW 301
P+ +T +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -2
Query: 438 PAKSRRTMAWGSAYPS*MXTVWETPSPESSTIPVVRPDAYSESTAW 301
P +T S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 31.1 bits (67), Expect = 0.55
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -2
Query: 438 PAKSRRTMAWGSAYPS*MXTVWETPSPESSTIPVVRPDAYSESTAW 301
P+ +T +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 423 RTMAWGSAYPS*MXTVWETPSPESSTIPVVRPDAYSESTAW 301
+T +W S P T W +PSP+ T P ++T+W
Sbjct: 74 KTTSWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 444 SRPAKSRRTMAWGSAYPS*MXTVWETPSPESST 346
S P +T +W S P T W +PSP+ T
Sbjct: 103 SLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKT 135
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 444 SRPAKSRRTMAWGSAYPS*MXTVWETPSPESST 346
S P+ +T +W S P T W +P P+ +T
Sbjct: 115 SSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTT 147
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.41
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 93 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 245
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62)
Length = 331
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 183 APEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSP 299
APE +P + + NP+ R+ +HS +PP T+P
Sbjct: 138 APEPNPHVDSATSRNPRGQRQSKKPRGQRHSKKPPWTAP 176
>SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019)
Length = 348
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 183 APEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSP 299
APE +P + + NP+ R+ +HS +PP T+P
Sbjct: 295 APEPNPHVDSATSRNPRGQRQSKKPRGQRHSKKPPWTAP 333
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2
Query: 221 PQPQGQQREDD--QIMFETFNTPAMYVAIQAVLSLYASGRTTGI----VLDSGDGVSHTV 382
PQ G Q +++ +I+ F A+Y+ Q++L++Y+ +GI V D D + T
Sbjct: 535 PQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIVEQRVTDGTDEIHSTD 594
Query: 383 XIYEGYALPHAIV 421
Y LP +
Sbjct: 595 VNLAKYNLPDGTI 607
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 0.95
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 297 PSKPCSRCTRPVVPP 341
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_49724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 171 ELRVAPEEHPVLLTEAPLNPKANREKMTRSCSKHS 275
+L+ A EE+P LL EA P N +K C K S
Sbjct: 39 QLKKALEENPHLLEEATCLPALNNQKSGLECKKES 73
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 225 NPKANREKMTRSCSKHSTRPPCTSPSKPC 311
+P+ + + +C H+ R P T+PS PC
Sbjct: 348 DPQKHEDLAVWACYSHARREPSTAPSLPC 376
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 228 PKANREKMTRSCSK--HSTRPPCTSP--SKPCSRCTRPVVPPVS 347
P+ + T+ C+ H+T+PP T P +KP + R PP +
Sbjct: 121 PRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTT 164
>SB_25587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 93 LKYPIEHGIVTNWDDMEK--IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTRSCS 266
+K+ +H TN + I T + LR PE P+ + P PK +R RS
Sbjct: 117 IKHQNKHSKETNKGHTNQVVIVQTTSFYALRTTPEPFPMEIRGVPSEPKLHRAFHERSRH 176
Query: 267 KHSTRPPCTSPSK 305
K + P P K
Sbjct: 177 KRQFQFPERQPEK 189
>SB_55265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 228 PKANREKMTRSCSKHSTRP-PCTSPSKPCSRCTRPVVP 338
P + + TR ++H + PCTSPS+ TR V+P
Sbjct: 438 PCTSPSRTTRVITRHPVKYYPCTSPSRTTRVITRNVLP 475
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 192 EHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRP 329
+H L + P EK +SC+ RP P KP C+ P
Sbjct: 900 DHWAKLGKCASRPSYMMEKCQKSCNACPPRPHKLIPEKPKGTCSEP 945
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 282 PPCTSPSKPCSRCTRPVVPPVSC 350
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 198 PVLLTEAPLNPKANRE-----KMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS 347
P ++P++ +AN+ + + S SK S+RPP S + S+ + V+PP S
Sbjct: 413 PPQSVKSPIHFQANKSPPFHPQRSPSASKPSSRPPPLSSVQNPSKQDKKVIPPAS 467
>SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09)
Length = 1396
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = -1
Query: 424 THDGVGECVSFXXXXXXXDTVAGVQHDTGGTTGRVQREHGLDGDVHGGRVECFEHDLVIF 245
T +G GE VSF +GVQ G+ +R H D D E E D V +
Sbjct: 63 TPEGEGEAVSFEGPFLDEPGPSGVQQQQQEGRGK-KRSH--DSDDEDEEEEEEEEDEVTY 119
Query: 244 SLLALGLRGASVSXTGCS 191
L + R ++ T C+
Sbjct: 120 DLRQVTTRHSTKMRTDCT 137
>SB_46598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1910
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 372 ETPSPESSTIPVVRPDAYSESTAWMA--TYMAGVLNVSNMIWSSSLCWPW 229
ETP+P + P PDA TAW++ T G+ S + SSL W
Sbjct: 145 ETPTPALESAPAAMPDA--TDTAWVSSNTRRTGLPLKSTSLPRSSLIHIW 192
>SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/74 (21%), Positives = 30/74 (40%)
Frame = -1
Query: 313 EHGLDGDVHGGRVECFEHDLVIFSLLALGLRGASVSXTGCSSGATRSSL*KV*CQIFSMS 134
+ GL + H G V C HD++ + + + +S C R + CQ+ +
Sbjct: 347 QEGLTTEAHRGHVRCKMHDIITCKMQDVRCK---MSDARCQMQDVRCKMSDARCQMHDVR 403
Query: 133 SQLVTIPCSMGYLR 92
++ C M +R
Sbjct: 404 CKMSDARCQMQDVR 417
>SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)
Length = 1033
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 275 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPH 412
NT AI V S S R T I + SG+ ++ TV I + A PH
Sbjct: 345 NTVGSKSAITRVYSPTGSVRPTKIFVKSGESLTLTVGIADLLASPH 390
>SB_12097| Best HMM Match : Birna_VP5 (HMM E-Value=4.6)
Length = 383
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +3
Query: 90 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-----PVLLTEAPLNPKANREKMT 254
+L Y + HG+ + + + + LR A H P+L T A+ ++T
Sbjct: 223 SLGYQVAHGLYARHNTLTRTRAPSRSCSLRTAQHPHTGTKSPMLSTHGTTPSLAHGYQVT 282
Query: 255 RSC-SKHSTRPPCTSPSKPCS 314
+ ++H+T PS+PCS
Sbjct: 283 HALYARHNTLTRTRVPSRPCS 303
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = +3
Query: 186 PEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 341
P +HP + + + + + + K + PP + +P R R + PP
Sbjct: 1832 PTDHPDIPVDGDTAQSTSSDGPSLAAEKATVEPPIIASPQPLRRSARNIKPP 1883
>SB_41338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 72 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 100
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 372 ETPSPESSTIPVVRPDAYSESTAW 301
ETP+PE + P PDA TAW
Sbjct: 154 ETPTPELESAPAAMPDA--TDTAW 175
>SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1)
Length = 406
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 151 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 179
>SB_21651| Best HMM Match : ETF_alpha (HMM E-Value=9.7)
Length = 166
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 105 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 133
>SB_15033| Best HMM Match : Dynein_light (HMM E-Value=4)
Length = 434
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 332 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 360
>SB_10353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 72 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 100
>SB_8096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 5 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 33
>SB_5141| Best HMM Match : Synaptobrevin (HMM E-Value=0.0092)
Length = 604
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 378 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 406
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 543 ELKRQIGQTKTRPHCTAESQTCSPSTKSI 571
>SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18)
Length = 125
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRP 329
KM+R + + CT P SRCT+P
Sbjct: 50 KMSRCTQQPNEMSRCTQPPHEMSRCTQP 77
>SB_53169| Best HMM Match : DUF58 (HMM E-Value=3.2)
Length = 254
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 246 KMTRSCSKHSTRPPCTSPSKPCSRCTRPV 332
++ R + TRP CT+ S+ CS T+ +
Sbjct: 193 ELKRKIGQTKTRPHCTAESQTCSPSTKSI 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,422,231
Number of Sequences: 59808
Number of extensions: 359165
Number of successful extensions: 1312
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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