Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00559X
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 183 5e-47
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 183 5e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 183 7e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 183 7e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 9e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 9e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 4e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 4e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 4e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 169 1e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 143 5e-35
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 137 5e-33
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 2e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 77 7e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 3e-12
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 68 4e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 8e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 54 7e-08
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 43 1e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 43 1e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 41 4e-04
At5g35940.1 68418.m04325 jacalin lectin family protein similar t... 30 1.0
At1g32190.1 68414.m03959 expressed protein 30 1.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.0
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 1.8
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 29 1.8
At5g05480.1 68418.m00590 expressed protein 29 2.4
At5g27090.1 68418.m03232 MADS-box family protein contains Pfam p... 28 3.1
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 28 3.1
At1g55380.1 68414.m06334 DC1 domain-containing protein contains ... 28 3.1
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.2
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 4.2
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 4.2
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 27 5.5
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 27 5.5
At1g76360.1 68414.m08872 protein kinase, putative similar to pro... 27 5.5
At5g56890.1 68418.m07099 protein kinase family protein contains ... 27 7.3
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 7.3
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family... 27 7.3
At3g54270.1 68416.m05998 sucrose-phosphatase 3 (SPP3) nearly ide... 27 7.3
At3g10490.2 68416.m01259 no apical meristem (NAM) family protein... 27 7.3
At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.6
At3g51630.1 68416.m05662 protein kinase family protein contains ... 27 9.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 5e-47
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRV
Sbjct: 39 RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 161 bits (392), Expect = 2e-40
Identities = 77/94 (81%), Positives = 85/94 (90%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 114 PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+ LMKILTERGY FT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDSLMKILTERGYMFTTTAE 207
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 5e-47
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRV
Sbjct: 39 RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 167 bits (407), Expect = 3e-42
Identities = 79/94 (84%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGYSFT++A+
Sbjct: 174 PHAILRLDLAGRDLTDYLMKILTERGYSFTTSAE 207
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 7e-47
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV
Sbjct: 39 RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRV 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 167 bits (406), Expect = 4e-42
Identities = 79/94 (84%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT++LMKILTERGYSFT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDHLMKILTERGYSFTTTAE 207
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 7e-47
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV
Sbjct: 39 RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRV 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 167 bits (406), Expect = 4e-42
Identities = 79/94 (84%), Positives = 88/94 (93%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT++LMKILTERGYSFT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDHLMKILTERGYSFTTTAE 207
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (444), Expect = 9e-47
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV
Sbjct: 39 RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRV 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHP+LLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPILLTEAPLNPKANREKMTQ 123
Score = 163 bits (397), Expect = 5e-41
Identities = 78/94 (82%), Positives = 86/94 (91%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+ LMKILTERGYSFT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAE 207
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 9e-47
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRV
Sbjct: 39 RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRV 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHP+LLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPILLTEAPLNPKANREKMTQ 123
Score = 163 bits (397), Expect = 5e-41
Identities = 78/94 (82%), Positives = 86/94 (91%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+ LMKILTERGYSFT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAE 207
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (439), Expect = 4e-46
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 39 RPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRI 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 163 bits (395), Expect = 8e-41
Identities = 76/94 (80%), Positives = 87/94 (92%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEG++L
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGY FT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDYLMKILTERGYMFTTTAE 207
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (439), Expect = 4e-46
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 39 RPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRI 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 163 bits (395), Expect = 8e-41
Identities = 76/94 (80%), Positives = 87/94 (92%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEG++L
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGY FT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDYLMKILTERGYMFTTTAE 207
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (439), Expect = 4e-46
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 39 RPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRI 98
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
APEEHPVLLTEAPLNPKANREKMT+
Sbjct: 99 APEEHPVLLTEAPLNPKANREKMTQ 123
Score = 163 bits (395), Expect = 8e-41
Identities = 76/94 (80%), Positives = 87/94 (92%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV IYEG++L
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSL 173
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LT+YLMKILTERGY FT+TA+
Sbjct: 174 PHAILRLDLAGRDLTDYLMKILTERGYMFTTTAE 207
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 169 bits (410), Expect = 1e-42
Identities = 70/85 (82%), Positives = 82/85 (96%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 182
RPRH+GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 40 RPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRL 99
Query: 183 APEEHPVLLTEAPLNPKANREKMTR 257
PEEHP+LLTEAPLNPK NREKMT+
Sbjct: 100 EPEEHPILLTEAPLNPKVNREKMTQ 124
Score = 147 bits (357), Expect = 3e-36
Identities = 68/94 (72%), Positives = 83/94 (88%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTV IYEGYAL
Sbjct: 115 PKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYAL 174
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PHAI+RLDLAGR+LTEYL KI+ ERGY++T++A+
Sbjct: 175 PHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAE 208
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 143 bits (347), Expect = 5e-35
Identities = 60/78 (76%), Positives = 73/78 (93%)
Frame = +3
Query: 24 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 203
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 204 LLTEAPLNPKANREKMTR 257
LLTEAPLNPKA+REKMT+
Sbjct: 61 LLTEAPLNPKADREKMTQ 78
Score = 130 bits (314), Expect = 5e-31
Identities = 61/88 (69%), Positives = 72/88 (81%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V IYEG AL
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSAL 128
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYS 490
PHAI+RLDLAGR LT YLMKI+ ERGY+
Sbjct: 129 PHAILRLDLAGRHLTNYLMKIMMERGYT 156
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 137 bits (331), Expect = 5e-33
Identities = 59/94 (62%), Positives = 82/94 (87%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + QIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTV +YEGYAL
Sbjct: 103 PKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYAL 162
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PH I+RLDL GR+LT+YL++I+TERGY++T++A+
Sbjct: 163 PHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAE 196
Score = 134 bits (323), Expect = 4e-32
Identities = 58/76 (76%), Positives = 65/76 (85%)
Frame = +3
Query: 30 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 209
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 210 TEAPLNPKANREKMTR 257
TEAP NPKANREKMT+
Sbjct: 97 TEAPYNPKANREKMTQ 112
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (243), Expect = 2e-22
Identities = 43/94 (45%), Positives = 65/94 (69%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P + + + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H V + +GY+
Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSF 172
Query: 407 PHAIVRLDLAGRELTEYLMKILTERGYSFTSTAD 508
PH R+++AGR +T YL+ +L+ RGY+ TAD
Sbjct: 173 PHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTAD 206
Score = 91.1 bits (216), Expect = 4e-19
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +3
Query: 9 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 188
R++ ++ KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P
Sbjct: 40 RYEESLMEQQVKDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINP 99
Query: 189 EEHPVLLTEAPLNPKANREKM 251
+ +LLT+ PLNP NREKM
Sbjct: 100 SDCKILLTDPPLNPSKNREKM 120
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 77.0 bits (181), Expect = 7e-15
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Frame = +2
Query: 218 SPQPQGQQRE-DDQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 379
SP + RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 380 VXIYEGYALPHAIVRLDLAGRELTEYLMKILTERG 484
V + EGY + I + +AG+++T ++ +++ ERG
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
Score = 74.5 bits (175), Expect = 4e-14
Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +3
Query: 45 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 215
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 216 APLNPKANRE 245
+PL P +RE
Sbjct: 127 SPLTPPESRE 136
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 36 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 212
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 213 EAPLNPKANREK 248
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 67.7 bits (158), Expect = 4e-12
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 227
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 228 PKANREK 248
+ REK
Sbjct: 136 TQQQREK 142
Score = 67.3 bits (157), Expect = 6e-12
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 236 QQREDD-QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPH 412
QQRE ++MFE + PA+++A VL+ +A+GR T +V+D G G + +++GY L
Sbjct: 138 QQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQK 197
Query: 413 AIVRLDLAGRELTEYLMKILTERG 484
A+V L G LT+ L+K L +G
Sbjct: 198 AVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 60.1 bits (139), Expect = 8e-10
Identities = 32/76 (42%), Positives = 42/76 (55%)
Frame = +2
Query: 227 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYAL 406
P+ + + Q+MFETFN Y + QAVLSLYA GR +G +D G G + EG
Sbjct: 100 PKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQ 159
Query: 407 PHAIVRLDLAGRELTE 454
A R +L G ELT+
Sbjct: 160 HIASKRFELGGTELTK 175
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTR 257
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQ 109
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = +2
Query: 239 QREDDQIMFETFNTPAMYVAI-QAVLSLYASGRTT---------GIVLDSGDGVSHTVXI 388
QR D+++FE F ++Y+A Q+++ LY + R +V+D G +H V +
Sbjct: 110 QRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPV 169
Query: 389 YEGYALPHAIVRLDLAGRELTEYLMKILTER 481
+ L HAI R+DL G+ T YL ++++ R
Sbjct: 170 LHNFTLNHAIKRIDLGGKAFTNYLKELVSYR 200
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 93 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANR 242
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ P R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVR-LDL 433
++F+ N PA+ QAVL+LYA+ RT+GIV++ G V + I G + V +
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGF 283
Query: 434 AGRELTEYLMKILTERGYSFTS 499
+LT +L + + E SF S
Sbjct: 284 GALKLTGFLKEKMQENNISFQS 305
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVR-LDL 433
++F+ N PA+ QAVL+LYA+ RT+GIV++ G V + I G + V +
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGF 283
Query: 434 AGRELTEYLMKILTERGYSFTS 499
+LT +L + + E SF S
Sbjct: 284 GALKLTGFLKEKMQENNISFQS 305
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +2
Query: 254 QIMFETFNTPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVXIYEGYALPHAI 418
+++FET+ PA+ + A S L+ + GIVL G +H++ +G +
Sbjct: 137 ELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGS 196
Query: 419 VRLDLAGRELTEYLMKILTERGYSFTST 502
R ++ G +T+YL ++L+ + Y F S+
Sbjct: 197 SRTNIGGYHVTDYLKQLLSLK-YPFHSS 223
Score = 31.1 bits (67), Expect = 0.45
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 3 RPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-----KYPIEHGIVTNWDDMEKIWHHTFY 167
RPRH+ G+ + VGD S + P + +V ++ ME I + F
Sbjct: 51 RPRHKAT----GETVTIVGDLDPSMMKYFDCTRSGPRSPFDSNVVYQFEIMEYILDYAFD 106
Query: 168 N-ELRVAPEEHPVLLTEAPLNPKANREKM 251
+ +HP+L+TE NP +R KM
Sbjct: 107 RLGANGSGIDHPILITECACNPVQSRSKM 135
>At5g35940.1 68418.m04325 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 444
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 272 FNTPAMYVAIQAVLSLYASGRTTGIVLDSG---DGVSHTVXIYEGYALPHAIVRLDLAGR 442
++ A ++ + A S G+ TG D G DG+ Y+G ++ H V D AG+
Sbjct: 135 YSLGAYFIKVLATKSGMQGGQNTGKSYDYGGDYDGIRKVYVTYDGTSIRHMRVDYDKAGQ 194
Query: 443 -ELTEY 457
E EY
Sbjct: 195 VECYEY 200
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 261 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCW 353
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 60 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 239
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 240 REKMTR 257
REK R
Sbjct: 225 REKAHR 230
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 60 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 239
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 240 REKMTR 257
REK R
Sbjct: 225 REKAHR 230
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 186 PEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRP--VVPP 341
P E P E P PK + T + + PP TS S P S T P + PP
Sbjct: 142 PGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTDPSTLAPP 195
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -1
Query: 274 ECFEHDLVIFSLLALGLRGASVSXTGCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGY 98
+C HD +F L G + GC S + S + + C+ F + + T+PC Y
Sbjct: 510 DCHPHDHPLFFNLTKG------NCMGCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHY 562
Query: 97 LRVRIPLLLC 68
R PL LC
Sbjct: 563 THDRHPLTLC 572
>At5g05480.1 68418.m00590 expressed protein
Length = 608
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +3
Query: 180 VAPEEHPVLLTEAP---LNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRP 329
V P+E+ L P L P + S + RPP T+P P S C P
Sbjct: 44 VEPQEYEELRRPLPSDQLTPSCSHVLFRHSFANTINRPPFTTPYTPPSSCISP 96
>At5g27090.1 68418.m03232 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL54
Length = 187
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 222 LNPKANREKMTRSCSKHSTRPPCTSPS 302
L P+ N+ ++ +SC+ +ST P +SPS
Sbjct: 142 LQPEKNQTELGQSCAVYSTTYPLSSPS 168
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 186 PEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPV 344
PE P + ++ P+N + ++ + S PP P P P+VPP+
Sbjct: 159 PENQPEICSQKPINLRGSKPLLPDP----SFPPPLQDPPNPSPLPNLPIVPPL 207
>At1g55380.1 68414.m06334 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -1
Query: 274 ECFEHDLVIFSLLALGLRGASVSXTGCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGY 98
+C HD +F L G + GC S S + + C+ F + + T+PC Y
Sbjct: 471 DCHPHDHPLFFNLTKG------NCMGCGSDNCSSYFLECIKCKSF-LGIKCATLPCEAHY 523
Query: 97 LRVRIPLLLC 68
+ R P+ LC
Sbjct: 524 IHDRHPITLC 533
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 148 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 59
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 140 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 33
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 171 ELRVAPEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS 347
E+R P P+ + +P P ++ KM+ + +S PP +S P R P PP S
Sbjct: 393 EVRTLPP--PIYVYSSPPPPPSS--KMSPTVRAYSPPPPPSSKMSPSVRAYSPPPPPYS 447
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 228 PKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 341
P NRE + + K ++P PC RC PV P
Sbjct: 536 PPPNREFILKPTKKMLHIQAESTPGSPCPRCPEPVWRP 573
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 320 YASGRTTGIVLDSGDGVSHTVXIYEGYALPHAIVRLDLAGRELTEYLMKILTER 481
+ SG+T +V SG G S V + E + P++ ++ L G E+ +K L E+
Sbjct: 390 FPSGKTVAVVGGSGSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ 442
>At1g76360.1 68414.m08872 protein kinase, putative similar to
protein kinase APK1B, SWISS-PROT:P46573; contains
protein kinase domain, Pfam:PF00069
Length = 484
Score = 27.5 bits (58), Expect = 5.5
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Frame = +3
Query: 141 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR-EKMTRSCS---KHSTRPPCTSPSKP 308
EK H T + P E P T + NP + ++ TRS + TRP PSKP
Sbjct: 68 EKPQHRTT-RSVENPPREKPQEKTRSVENPPREKPQEKTRSVETPPQEKTRPVDNPPSKP 126
Query: 309 CSR--CTRPVVPP 341
+ R VPP
Sbjct: 127 VEKLGLGRKAVPP 139
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 216 APLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS 347
AP PK NR + S +T PP ++PS + P PP+S
Sbjct: 303 APSAPKFNRH--SHHTSPSTTPPPDSTPSNVHHHPSSPSPPPLS 344
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 199 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 41
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
protein
Length = 477
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +3
Query: 183 APEEHPVLLTEAPLNPKANREKMTRSCSKHSTRPPCTSP--SKPCSRCTRPVVP 338
AP +H L P P R S H T PP +P S+P P P
Sbjct: 365 APTKHSPLPPRNPPCPYEQRRPKGNSALNHHTAPPTPAPHRSQPHPPAPNPAPP 418
>At3g54270.1 68416.m05998 sucrose-phosphatase 3 (SPP3) nearly
identical to sucrose-phosphatase (SPP3) [Arabidopsis
thaliana] GI:16904077
Length = 425
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 342 PVVRPDAYSESTAWMATYMAGVLNVSNMIWSSSLCWPW 229
P++ PD S Y G VS+++W++ L + W
Sbjct: 67 PLLTPDIAVTSVGSEIVYGGGESTVSDVVWTARLDYKW 104
>At3g10490.2 68416.m01259 no apical meristem (NAM) family protein
similar to to NAC2 (GI:645671) [Arabidopsis thaliana];
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 451
Score = 27.1 bits (57), Expect = 7.3
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +3
Query: 102 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP---LNPKANREKMTRSCSKH 272
P EH N+D+ E+ E P VL EAP L K R+ + + S
Sbjct: 266 PEEHNNNNNYDENEETLKREQMEEEERPPRPVCVLNKEAPLPLLQYKRRRQSESNNNSSR 325
Query: 273 STRPPCTSPSKPCSRCT 323
+T+ C+S + T
Sbjct: 326 NTQDHCSSTTTTVDNTT 342
>At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 513
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 366 PSPESSTIPVVRPDAYSESTAWMATYMAGVL 274
P P TIP P A +T W + GV+
Sbjct: 296 PPPPQQTIPQTNPQAPPMTTFWQGNHNPGVV 326
>At3g51630.1 68416.m05662 protein kinase family protein contains
Pfam profile: PF00069 protein kinase domain
Length = 549
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 138 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTRSCS 266
ME W+ NE+ +PE L +E L N E + R C+
Sbjct: 49 MEVAWNQVKLNEVFRSPEPLQRLYSEVHLLKNLNHESIIRYCT 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,198,332
Number of Sequences: 28952
Number of extensions: 235381
Number of successful extensions: 883
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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