Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00558
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 546  RSTSKCLTSRTRTPHTSWNGSPTT*RPPCATIP 644
            R T+   T+R  T  T+W    TT  PP   +P
Sbjct: 1064 RPTTTSTTTRPTT--TNWPTQGTTIPPPAVVMP 1094



 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 161  QTKPTASTTRLYTTSASAL 217
            QTK T STT   TT+ S L
Sbjct: 1184 QTKTTTSTTTRPTTTVSQL 1202


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 164 TKPTASTTRLYTTSASALSNCP 229
           +K + STT   TT++SAL++ P
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTP 25


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 164 TKPTASTTRLYTTSASALSNCP 229
           +K + STT   TT++SAL++ P
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTP 25


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 387 PLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTSLPSS 524
           P ++ GS       + +L ++ FD+++   +  P HG     + SS
Sbjct: 718 PESNNGSSPSVLNAIEKLIEKSFDSRSRQNSSFPGHGPTTAPMGSS 763


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 404 KQTVPCLDCTRAHTTDV 454
           KQT  C    R HT D+
Sbjct: 299 KQTAICFKAPRYHTLDI 315


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +1

Query: 7   SGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEP 120
           SG G+L  ++     PD+  +   ++P+P  S+    P
Sbjct: 166 SGEGSLQENRYYNNSPDQYQSYQILLPTPTCSEASSSP 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,301
Number of Sequences: 336
Number of extensions: 3968
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)