Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00558
(669 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 189 2e-48
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 189 2e-48
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 182 2e-46
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 178 3e-45
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 145 3e-35
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 126 1e-29
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 105 2e-23
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 86 3e-17
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 85 7e-17
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 7e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 85 7e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 84 9e-17
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 84 9e-17
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 84 9e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 83 2e-16
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 83 2e-16
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 80 1e-15
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 65 4e-11
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 63 2e-10
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 59 3e-09
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 57 1e-08
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.002
SB_38971| Best HMM Match : SRCR (HMM E-Value=0) 33 0.28
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 32 0.49
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9) 30 1.5
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 29 2.6
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 29 3.4
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 3.4
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 29 4.5
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 25 5.5
SB_26394| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.88) 28 6.0
SB_2879| Best HMM Match : zf-C4_Topoisom (HMM E-Value=2) 28 6.0
SB_45588| Best HMM Match : Arg_repressor_C (HMM E-Value=7.7) 28 7.9
SB_5592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_55199| Best HMM Match : PKD (HMM E-Value=0.75) 28 7.9
SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 189 bits (460), Expect = 2e-48
Identities = 94/138 (68%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVP
Sbjct: 228 LVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDPRHGRYLT + + L + + P
Sbjct: 288 ELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKM+A
Sbjct: 348 NVKTAVCDIPPRGLKMSA 365
Score = 178 bits (434), Expect = 3e-45
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIMNT SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 203 DNEALYDICFRTLKLTTPTYGDLNH 227
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 189 bits (460), Expect = 2e-48
Identities = 94/138 (68%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVP
Sbjct: 228 LVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDPRHGRYLT + + L + + P
Sbjct: 288 ELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKM+A
Sbjct: 348 NVKTAVCDIPPRGLKMSA 365
Score = 178 bits (433), Expect = 4e-45
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIMNT S+VPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 203 DNEALYDICFRTLKLTTPTYGDLNH 227
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 182 bits (443), Expect = 2e-46
Identities = 92/138 (66%), Positives = 99/138 (71%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL FFMPGFAPLTSRGS+QYRALTVP
Sbjct: 173 LVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVP 232
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDP HGRYLT + + L + + P
Sbjct: 233 ELTQQMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPN 292
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKM+A
Sbjct: 293 NVKTAVCDIPPRGLKMSA 310
Score = 172 bits (419), Expect = 2e-43
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGM TLLI KIREEYPDRIMNT SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
Sbjct: 88 TGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 147
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 148 DNEALYDICFRTLKLTTPTYGDLNH 172
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 178 bits (434), Expect = 3e-45
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIMNT SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
Sbjct: 356 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 415
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 416 DNEALYDICFRTLKLTTPTYGDLNH 440
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQ 308
LVS TMSGVTTCLRFPGQ
Sbjct: 441 LVSATMSGVTTCLRFPGQ 458
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 145 bits (351), Expect = 3e-35
Identities = 70/138 (50%), Positives = 91/138 (65%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S TMSG+TTCLRFPGQLNADLRKLAVNM+P+PRLHFFMPGFAPLTSR YRALTV
Sbjct: 133 IISNTMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVA 192
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
+LTQ +FD KN++ AC+P+ G+YLT + + ++ R + P
Sbjct: 193 DLTQAIFDNKNLLIACNPKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPN 252
Query: 615 T*RPPCATIPPRGLKMAA 668
+ +PP +KM+A
Sbjct: 253 NGKVAVCDVPPHDMKMSA 270
Score = 116 bits (279), Expect = 2e-26
Identities = 60/109 (55%), Positives = 75/109 (68%), Gaps = 24/109 (22%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDET--- 171
TGSG+GTL++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E TDE
Sbjct: 24 TGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDEVSEI 83
Query: 172 ---------------------YCIDNEALYDICFRTLKLSTPTYGDLNH 255
+CIDNEALYDIC++TLKL+T TY DLNH
Sbjct: 84 VVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTLKLNTTTYSDLNH 132
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 126 bits (305), Expect = 1e-29
Identities = 64/127 (50%), Positives = 83/127 (65%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG+G+LL+SKIREEYPDR++++ V+PSP VS+TV EPYNATLS HQLV+ D CI
Sbjct: 51 TGSGLGSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICI 110
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH*FPSQCLVSPLALGSPVS*TLISENWP*TWFPSRV 360
DNEALY+IC+ LK TPTY +LN + +L P + S W P+ +
Sbjct: 111 DNEALYNICYNVLKRETPTYSELNSLIATTMSGVTTSLRFPGQDSHSSSFV--EWIPNNM 168
Query: 361 STSSCQV 381
T+ C V
Sbjct: 169 KTAVCDV 175
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 572 QNKNSSYFVEWIPNNVKTAVCD 637
Q+ +SS FVEWIPNN+KTAVCD
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCD 174
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 105 bits (253), Expect = 2e-23
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +3
Query: 342 MVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 509
MVPFPRLHFFMPGFAPL SR ++QY+ ++V ELTQQMFDA+NMM ACDPRHGRYLT
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLT 56
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Frame = +2
Query: 476 RL*PAP-RPLPHVAAIFRGRMSMK----EVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 637
RL P+ +PL + + RG + +K VDEQMLN QNKNS +FVEWIPNNVKT VCD
Sbjct: 126 RLRPSENQPLKEI--LCRGGLRLKGGKFRVDEQMLNTQNKNSPFFVEWIPNNVKTTVCD 182
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+S +S +T LRF G LN DL + N+VP+PR+HF M +AP+ S + LTV
Sbjct: 601 LISQLVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVA 660
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 661 DITNSCFEPANQMVKCDPRHGKYM 684
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 949 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 1008
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 1009 DNEAIYDICRRNLDIERPTYTNLN 1032
Score = 81.8 bits (193), Expect = 5e-16
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P +S VVEPYN+ L+ H +E++D + +
Sbjct: 516 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMV 575
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 576 DNEAIYDICRRNLDIERPTYTNLN 599
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 1034 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 1093
Query: 435 ELTQQMFDAKNMM 473
E+T F+ N M
Sbjct: 1094 EITNACFEPANQM 1106
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 689 LYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGI 726
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T+ LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 1141 LIGQIVSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVA 1200
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T FD N M CDPRHG+Y+
Sbjct: 1201 QITNMCFDPNNQMVKCDPRHGKYM 1224
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +L+ + +Y + +V P+P +S VVEPYN+ L+ H +E++D T+ +
Sbjct: 1056 TGSGFASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMV 1115
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YD+C R L + P Y +LN
Sbjct: 1116 DNEAIYDLCRRNLDVERPGYANLN 1139
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF M +AP+ S + +TV
Sbjct: 195 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVS 254
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
+LT F+ N M CDPRHG+Y+
Sbjct: 255 DLTNACFEPANQMVKCDPRHGKYM 278
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + +V P+P++S VVEPYN+ LS H +E++D + +
Sbjct: 110 TGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMV 169
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 170 DNEAIYDICRRNLDIERPTYTNLN 193
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 283 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 320
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 155 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 214
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 215 EITNSCFEPANQMVKCDPRHGKYM 238
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + +V P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 70 TGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 129
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 130 DNEAIYDICRRNLDIERPTYTNLN 153
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 230 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 289
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 290 EITNACFEPANQMVKCDPRHGKYM 313
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 145 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMV 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 205 DNEAIYDICRRNLDIERPTYTNLN 228
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 318 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 215 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 274
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 275 EITTSCFEPANQMVKCDPRHGKYM 298
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 563 TGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMV 622
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 623 DNEAIYDICRRNLDIERPTYTNLN 646
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 130 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 189
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 190 DNEAIYDICRRNLDIERPTYTNLN 213
Score = 72.1 bits (169), Expect = 4e-13
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +3
Query: 309 LNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDP 488
LN DL + N+VP+PR+HF M +AP+ S + +TV +LT F+ N M CDP
Sbjct: 664 LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
Query: 489 RHGRYL 506
RHG+Y+
Sbjct: 724 RHGKYM 729
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
+FRG + K+V+ + I+ K + FV+W P K +
Sbjct: 303 LFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 340
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
+FRG + K+V+ + I+ K + FV+W P K +
Sbjct: 734 LFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 771
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 663 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 722
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 723 EITNACFEPANQMVKCDPRHGKYM 746
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 230 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 289
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 290 EITNACFEPANQMVKCDPRHGKYM 313
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 145 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 205 DNEAIYDICRRNLDIERPTYTNLN 228
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 578 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 637
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 638 DNEAIYDICRRNLDIERPTYTNLN 661
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 318 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 355
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 751 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 788
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 84.6 bits (200), Expect = 7e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 28 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 87
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 88 DITNACFEPANQMVKCDPRHGKYM 111
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 178 IDNEALYDICFRTLKLSTPTYGDLN 252
+DNEA+YDIC R L + PTY +LN
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLN 26
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 116 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 153
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y R +V P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 276 TGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 335
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 336 DNEAIYDICRRNLDIERPTYTNLN 359
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S VT LRF G LN DL + N+VP+PR+HF + +AP+ + ++V
Sbjct: 361 LIGQIVSSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVA 420
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPR+G+Y+
Sbjct: 421 EITSACFEPSNQMVKCDPRYGKYM 444
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVK 622
++RG + K+V+ + I+ K + FV+W P K
Sbjct: 449 LYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFK 483
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 84.6 bits (200), Expect = 7e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 229 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 288
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 289 DITNACFEPANQMVKCDPRHGKYM 312
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 144 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 203
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 204 DNEAIYDICRRNLDIERPTYTNLN 227
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 317 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 354
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 815 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 874
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 875 EITNACFEPANQMVKCDPRHGKYM 898
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 294 LMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 353
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 354 EITNACFEPANQMVKCDPRHGKYM 377
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 730 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 789
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 790 DNEAIYDICRRNLDIERPTYTNLN 813
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 209 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 268
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 269 DNEAIYDICRRNLDIERPTYTNLN 292
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 382 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 419
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 903 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 940
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 28 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 87
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 88 EITNACFEPANQMVKCDPRHGKYM 111
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 178 IDNEALYDICFRTLKLSTPTYGDLN 252
+DNEA+YDIC R L + PTY +LN
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLN 26
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 116 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 153
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 230 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 289
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 290 EITNACFEPANQMVKCDPRHGKYM 313
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 145 TGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 205 DNEAIYDICRRNLDIDRPTYTNLN 228
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 318 LYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGI 355
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 167 LMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 226
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 227 EITNACFEPANQMVKCDPRHGKYM 250
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 82 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 141
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 142 DNEAIYDICRRNLDIERPTYTNLN 165
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 255 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 292
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 155 LMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVA 214
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 215 EITNACFEPANQMVKCDPRHGKYM 238
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 70 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 129
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 130 DNEAIYDICRRNLDIERPTYTNLN 153
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 243 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 280
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + ++ P+P++S VVEPYN+ L+ H +E++D + +
Sbjct: 20 TGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 79
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + PTY +LN
Sbjct: 80 DNEAIYDICRRNLDIERPTYTNLN 103
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 356
L+ +S +T LRF G LN DL + N+VP+P
Sbjct: 105 LMGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + +V P+P ++ VVEPYN+ L+ H +E++D + +
Sbjct: 135 TGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMV 194
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 195 DNEAIYDICRRNLDIERPSYTNLN 218
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S VT LRF G LN DL + N+VP+PR+HF + +AP+ S + LTV
Sbjct: 220 LIGQIVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVA 279
Query: 435 ELT 443
E+T
Sbjct: 280 EIT 282
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 527 GRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
G + +K+V+ + I+ K + FV+W P K +
Sbjct: 305 GDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 339
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG+GT +++ + ++YPD T +V PS D + PYN+ L++HQL E+ D I
Sbjct: 157 TGSGVGTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPI 215
Query: 181 DNEALYDIC 207
+N+AL DIC
Sbjct: 216 ENQALVDIC 224
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/84 (28%), Positives = 44/84 (52%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
+V+ + +T+ RF G LN DL ++ +N+VPFP+LH+ + PL + + +
Sbjct: 277 IVANLILNMTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLD 336
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++ F + + DP+H YL
Sbjct: 337 QMFTDAFSKDHQLIKADPKHNLYL 360
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Frame = +2
Query: 476 RL*PAP-RPLPHVAAIFRGRMSMK----EVDEQMLNIQNKNSSYFVEWIPNNVKTAVCD 637
RL P+ +PL + + RG + +K VDEQMLN QNKNS +FVEWIPNNVKT VCD
Sbjct: 64 RLRPSENQPLKEI--LCRGGLRLKGGKFRVDEQMLNTQNKNSPFFVEWIPNNVKTTVCD 120
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKV 99
TGSG+GTL++SKIREEYPDRI++ SVVPSPKV
Sbjct: 99 TGSGLGTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/84 (32%), Positives = 51/84 (60%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG+G + + +R+ YP+ + +VV + + +V+ YNATL++ QL +++D +
Sbjct: 151 TGSGVGAFVTNSLRDFYPNSFIVN-NVVWPYSMGEVIVQNYNATLTLAQLYKSSDAIIIV 209
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
+N+ L IC + L L ++ D+N
Sbjct: 210 ENDKLQKICSKLLNLKHISFRDIN 233
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 398
LVS M+ TT LR+PG +N DL L +++P PRLHF M G+ PLT+
Sbjct: 267 LVSTIMATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 88 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 252
S +SD VV+PYN+ L++ +L +N D +DN AL I L++ PT+ +N
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVN 265
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 37 IREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 189
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYC 177
TGSG+G L+ + + YP + + SV SP VS ++ ++ YN+ LS+ L N D
Sbjct: 127 TGSGLGARLVETLSDAYP--LAHVMSVAVSPHVSGESPLQHYNSLLSLAALQRNADGILL 184
Query: 178 IDN-EALYDICFRTLKLS 228
N + L + + +K+S
Sbjct: 185 FHNDDVLRQVMLQRVKIS 202
>SB_38971| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2436
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -2
Query: 533 CDRGRWQRREVAAVARVTGGHHVLGVEHLLCELGYSQGTVLSASTGCEGSET 378
CDRG W E V R G L V G GTV S C G+E+
Sbjct: 239 CDRG-WDLSEATVVCRQLGFPSALSVVKCCDSYGSGNGTVWMDSVKCNGTES 289
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -2
Query: 533 CDRGRWQRREVAAVARVTGGHHVLGVEHLLCELGYSQGTVLSASTGCEGSET 378
CDRG W E V R G L V G GTV S C G+E+
Sbjct: 1107 CDRG-WDLSEATVVCRQLGFPSALSVVKCCDSYGSGNGTVWMDSVKCNGTES 1157
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -2
Query: 533 CDRGRWQRREVAAVARVTGGHHVLGVEHLLCELGYSQGTVLSASTGCEGSET 378
CDRG W E V R G L G GTV S C G+E+
Sbjct: 445 CDRG-WDLSEATVVCRQLGFPSALSAVKCCGSYGSGNGTVWMDSVKCNGTES 495
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 533 CDRGRWQRREVAAVARVTGGHHVLGVEHLLCELGYSQGTVLSASTGCEGSET 378
CD G W E V R G L G GTV S C G+E+
Sbjct: 790 CDIG-WDLSEATVVCRQLGFPSALSAVKCCDSYGSGNGTVWMDSVKCNGTES 840
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 32.3 bits (70), Expect = 0.37
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTISFPHNVW----CHHLP*VPRSVER*SQK 328
QT PT+S R T S +CPH P TL S N C H P P S +
Sbjct: 466 QTPPTSS--RANTAHISQCKHCPHQPVQTLPTSARTNTAHISPCKHCPHQPVQTLPTSAR 523
Query: 329 IGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTRAHTTDVRRQEH 469
H SP H PH P QT+P +R +T + +H
Sbjct: 524 ANTAH----ISPYKHC----PHQP-VQTLP--TSSRTNTAHISPYKH 559
Score = 29.5 bits (63), Expect = 2.6
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTISFPHNVWCH-----HLP*VPRSVER*SQ 325
QT PT+S T T S +CPH P TL S N H H P P S
Sbjct: 541 QTLPTSSRTN--TAHISPYKHCPHHPVQTLPTSARTNT-AHISPYKHCPHHPVQTLPTSA 597
Query: 326 KIGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTRAHTTDVRRQEH 469
+ H SP H PH P QT+P RA+T + + +H
Sbjct: 598 RANTAH----ISPCKHC----PHQP-VQTLP--TSARANTAHISQCKH 634
Score = 29.1 bits (62), Expect = 3.4
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTISFPHNVW----CHHLP*VPRSVER*SQK 328
QT PT++ T T S +CPH P TL S N C H P P S +
Sbjct: 566 QTLPTSARTN--TAHISPYKHCPHHPVQTLPTSARANTAHISPCKHCPHQPVQTLPTSAR 623
Query: 329 IGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTRAHTTDVRRQEH 469
H S H PH P QT+P RA+T + +H
Sbjct: 624 ANTAH----ISQCKHC----PHQP-VQTLP--TSARANTAHISPYKH 659
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTIS 259
QT PT+S T T S +CPH P TL S
Sbjct: 373 QTLPTSSRTN--TAHISPYKHCPHQPVQTLPTS 403
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 31.9 bits (69), Expect = 0.49
Identities = 42/140 (30%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Frame = +2
Query: 71 HNQ*SPRPKYQTLSSNHTMRLSQFTS*--LKTQTKPTASTTRLYTTSASALSNCPHPPTV 244
H Q P TL+ +T +S + QT PT+S R T S +CPH P
Sbjct: 97 HCQHQPVQTLPTLARTNTAHISPYKHCPHQPVQTPPTSS--RANTAHISQCKHCPHQPVQ 154
Query: 245 TLTISFPHNVWCH-----HLP*VPRSVER*SQKIGRKHGSLPASPLLHARFRSPHIPWKQ 409
TL S N H H P P S + H SP H PH P Q
Sbjct: 155 TLPTSARTNT-AHISPYKHCPHQPVQTLPTSARTNTAH----ISPYKHC----PHQP-VQ 204
Query: 410 TVPCLDCTRAHTTDVRRQEH 469
T+P RA+T + +H
Sbjct: 205 TLP--TSARANTAHISPYKH 222
Score = 30.7 bits (66), Expect = 1.1
Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTISFPHNVW----CHHLP*VPRSVER*SQK 328
QT PT++ T T S +CPH P TL S N C H P P S +
Sbjct: 229 QTLPTSARTN--TAHISPYKHCPHHPVQTLPTSARTNTAHISPCKHCPHQPVQTLPTSAR 286
Query: 329 IGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTRAHTTDV 454
H SP H PH P QT+P +RA+T +
Sbjct: 287 TNTAH----ISPCKHC----PHQP-VQTLP--TSSRANTAHI 317
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.1 bits (67), Expect = 0.85
Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 PGPVWAPSS-SQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTA 178
PG PS+ S S STP+ T + S TLS T + S T + P+
Sbjct: 177 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPST 236
Query: 179 STTRLYTTSASALSNCPHPPTVTLTISFPHNVWCHHLP*VPRSVER*SQKIGRKHGSLPA 358
+T + T S + + P P++ T S P P P + S S P+
Sbjct: 237 LSTPI-TPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPS 295
Query: 359 SPLLHARFRSPHIPWKQTVPCLDCT 433
+P + +P P + P T
Sbjct: 296 TPSTPSTPSTPSAPSTPSTPSTPST 320
Score = 31.1 bits (67), Expect = 0.85
Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Frame = +2
Query: 2 PGPVWAPSS-SQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTA 178
PG PS+ S S STP+ T + S TLS T + S T + P+
Sbjct: 727 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPST 786
Query: 179 STTRLYTTSASALSNCPHPPTVTLTISFPHNVWCHHLP*VPRSVER*SQKIGRKHGSLPA 358
+T + T S + + P P++ T S P P P + S S P+
Sbjct: 787 LSTPI-TPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPS 845
Query: 359 SPLLHARFRSPHIPWKQTVPCLDCT 433
+P + +P P + P T
Sbjct: 846 TPSTPSTPSTPSAPSTPSTPSTPST 870
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 349 PSRVSTSSCQVSLPSHPVEADSTVP*LYPSSHNRCSTPRT*WPPVTRATAATSRRCHLP 525
PS ST C S PS P + P +H+ TP T P T +T +T H P
Sbjct: 398 PSTPSTP-CTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTP 455
>SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9)
Length = 343
Score = 30.3 bits (65), Expect = 1.5
Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTISFPHNVWCH-----HLP*VPRSVER*SQ 325
QT PT++ T T S +CPH P TL S N H H P P S
Sbjct: 153 QTLPTSARTN--TAHISPYKHCPHQPVQTLPTSARTNT-AHISPYKHCPHQPVQTLPTSA 209
Query: 326 KIGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTR-AHTTDVRRQEH 469
+ H SP H PH P QT+P T AH + + ++H
Sbjct: 210 SVNTAH----ISPCKHC----PHQP-VQTLPTSARTNTAHISPCKHRQH 249
Score = 28.7 bits (61), Expect = 4.5
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +2
Query: 161 QTKPTASTTRLYTTSASALSNCPHPPTVTLTIS----FPHNVWCHHLP*VPRSVER*SQK 328
QT PT++ R T S +CPH P TL S H + H P P S +
Sbjct: 3 QTLPTSA--RANTAHISPCKHCPHHPVQTLPTSARANTAHIIPYKHCPHQPVQTLPTSAR 60
Query: 329 IGRKHGSLPASPLLHARFRSPHIPWKQTVPCLDCTRAHTTDVRRQEH 469
H SP H PH P QT+P RA+T + +H
Sbjct: 61 TNTAH----ISPCKHC----PHQP-VQTLP--TSARANTAHISPYKH 96
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 433 PSSHN-RCSTPRT*WPPVTRATAATSRRCHLPRSHVHEGGRRAN 561
P+SHN + PRT P TR ++ S R P HE G +N
Sbjct: 1651 PASHNPKQLYPRTTSPSSTRESSPASSRSSSPPRQQHESGSESN 1694
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 PGPVWAPSSSQRSVKS-TPTES*THN-Q*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPT 175
P + P++S S TPT S T +P P Y T ++++T S +TS P+
Sbjct: 58 PTTSYTPTTSYTPTTSYTPTPSYTPTTSYTPTPSY-TSTTSYTPTTS-YTSTTSYTPTPS 115
Query: 176 ASTTRLYTTSASALSNCPHPPTVTLT 253
+ T YT + S S + PT + T
Sbjct: 116 YTPTPSYTPTPSYTSTTSYTPTTSYT 141
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 182 TTRLYTTSASALSNCPHPPTVTLTISFPHN 271
TTR YT + + S+ H PT T T+ PHN
Sbjct: 18 TTRHYTITLTTRSHSRHHPTSTFTVR-PHN 46
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 33 KDP*RVPRQNHEHIISSPLAQSIR 104
+D RV R+N HIIS+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 48 VPRQNHEH---IISSPLAQSIRHCRRTIQCDSLSSPAS*KHRRNLLHRQRGSIRHLLPHS 218
+P ++H + +I +PL+ SI HCR + +P S + H I + P S
Sbjct: 327 IPHRHHPYPTVVIYTPLSSSIHHCRHLYTTVVIYTPLS-SSIHHCHHLYTTVIIYTPPSS 385
Query: 219 QTVHTHL 239
H HL
Sbjct: 386 SIHHRHL 392
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 PGPVWAPSSSQRSVKS-TPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTA 178
P P + P++S S S T T S T P P Y +S T T+ T T T
Sbjct: 34 PTPSYTPTTSYTSTTSYTSTTSYT-----PTPSYTPTTSYTTTTSYTSTTSYTTTTSYTP 88
Query: 179 STTRLYTTSASALSNCPHPPTVTLTISF 262
+T+ TTS ++ ++ + T T S+
Sbjct: 89 TTSYTSTTSYTSTTSYTSTTSYTSTTSY 116
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 375 PGFAPLTSRGSRQYRALTVPELTQQMFDAK---NMMAA--CDPRHGRYLTSL-PSSAVAC 536
PG+ L++ GS Q T P +T +M+ K N +AA RH SL P SA
Sbjct: 118 PGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAARPATSRHATLAASLHPHSAPDF 177
Query: 537 P 539
P
Sbjct: 178 P 178
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 45 RVPRQNHEHIISSPLAQSIR 104
RV R+N HIIS+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 45 RVPRQNHEHIISSPLAQSIR 104
RV R+N HIIS+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 45 RVPRQNHEHIISSPLAQSIR 104
RV R+N HIIS+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 184 NEALYDICFRTLKLSTPTYG 243
N L+++ + TL + TPTYG
Sbjct: 182 NPNLWNLTYGTLSIETPTYG 201
Score = 21.4 bits (43), Expect(2) = 5.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 229 TPTYGDLNH*FPS 267
TPTYG L H P+
Sbjct: 231 TPTYGTLTHRAPT 243
>SB_26394| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.88)
Length = 842
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 185 TRLYTTSASALSNCPHPPTVTLTISFPHNVWCHHLP 292
+R+ TT + CPH + +S P ++WC +P
Sbjct: 221 SRVLTTQYLVFA-CPHHAVSGVRVSPPRSIWCSRVP 255
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 224 CPHPPTVTLTISFPHNVWCHHLP 292
CPH + +S P +WC +P
Sbjct: 109 CPHHAVSGVRVSSPRGIWCSRVP 131
>SB_2879| Best HMM Match : zf-C4_Topoisom (HMM E-Value=2)
Length = 610
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 488 RVTGGHHVLGVEHLLC 441
+ TG HHVL V+H+LC
Sbjct: 521 KYTGPHHVLTVDHVLC 536
>SB_45588| Best HMM Match : Arg_repressor_C (HMM E-Value=7.7)
Length = 271
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDNSSSWSQD 661
VAA+ + + K + + N++NK SS + NN VC SS QD
Sbjct: 84 VAAVISDKKTEKNFEYLVKNLRNKRSSLLHQLTRNN-DVMVCQISSHVEQD 133
>SB_5592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 488 RVTGGHHVLGVEHLLCELGYSQ 423
+ TG HHVL V+HLL + GY++
Sbjct: 1019 KYTGPHHVLTVDHLLLQ-GYTK 1039
>SB_55199| Best HMM Match : PKD (HMM E-Value=0.75)
Length = 462
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 173 TASTTRLYTTSASALSNCPHPPTVTLTISFPHNV 274
T S TRL+T + SA + PH +++ + PH V
Sbjct: 171 TTSNTRLHTVNLSANNTRPHAVSLSANNTRPHAV 204
>SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 494 RPLPHVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNN 616
+PLP + +IF + +MLN+QNK SSY E+ N
Sbjct: 263 KPLPKLKSIFTTLL-------EMLNVQNKTSSYVKEFYDIN 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,413,643
Number of Sequences: 59808
Number of extensions: 560378
Number of successful extensions: 2243
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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