Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00558
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 189 2e-48
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 183 9e-47
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 183 9e-47
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 183 1e-46
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 179 1e-45
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 122 3e-28
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 122 3e-28
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 87 8e-18
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 87 8e-18
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 87 8e-18
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 87 8e-18
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 85 6e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 85 6e-17
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 85 6e-17
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 85 6e-17
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 85 6e-17
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 85 6e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 84 8e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 84 8e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 84 8e-17
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 74 8e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 74 8e-14
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 33 0.14
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 33 0.18
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 32 0.32
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 30 1.3
Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 29 3.0
Z79695-7|CAO79774.1| 291|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 28 5.2
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 28 5.2
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 27 9.1
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 189 bits (460), Expect = 2e-48
Identities = 93/138 (67%), Positives = 102/138 (73%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYR+LTVP
Sbjct: 228 LVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVP 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDPRHGRYLT + + L + + P
Sbjct: 288 ELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRG+KMAA
Sbjct: 348 NVKTAVCDIPPRGVKMAA 365
Score = 173 bits (422), Expect = 7e-44
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIM T SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 203 DNEALYDICFRTLKLTTPTYGDLNH 227
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 183 bits (446), Expect = 9e-47
Identities = 90/138 (65%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR ++QYRA+TVP
Sbjct: 228 LVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVP 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQ FDAKNMMAACDPRHGRYLT+ + + L + + + P
Sbjct: 288 ELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKM+A
Sbjct: 348 NVKTAVCDIPPRGLKMSA 365
Score = 175 bits (425), Expect = 3e-44
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIMNT SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 203 DNEALYDICFRTLKLTTPTYGDLNH 227
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 183 bits (446), Expect = 9e-47
Identities = 90/138 (65%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR ++QYRA+TVP
Sbjct: 228 LVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVP 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQ FDAKNMMAACDPRHGRYLT+ + + L + + + P
Sbjct: 288 ELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKM+A
Sbjct: 348 NVKTAVCDIPPRGLKMSA 365
Score = 175 bits (425), Expect = 3e-44
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIMNT SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 203 DNEALYDICFRTLKLTTPTYGDLNH 227
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 183 bits (445), Expect = 1e-46
Identities = 91/138 (65%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G++ YRALTV
Sbjct: 228 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVA 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDPRHGRYLT R + L+ + + P
Sbjct: 288 ELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKMAA
Sbjct: 348 NVKTAVCDIPPRGLKMAA 365
Score = 170 bits (413), Expect = 9e-43
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREE+PDRIM++ SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
Sbjct: 143 TGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDIC+RTLKL+ PTYGDLNH
Sbjct: 203 DNEALYDICYRTLKLTNPTYGDLNH 227
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 182 bits (444), Expect = 2e-46
Identities = 91/138 (65%), Positives = 100/138 (72%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G++ YRALTV
Sbjct: 228 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVA 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDPRHGRYLT R + L + + P
Sbjct: 288 ELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKMAA
Sbjct: 348 NVKTAVCDIPPRGLKMAA 365
Score = 171 bits (417), Expect = 3e-43
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIM++ SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDIC+RTLKL+ PTYGDLNH
Sbjct: 203 DNEALYDICYRTLKLTNPTYGDLNH 227
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 179 bits (436), Expect = 1e-45
Identities = 88/138 (63%), Positives = 100/138 (72%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G++ YRALTV
Sbjct: 228 LVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVA 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
ELTQQMFDAKNMMAACDPRHGRYLT R + + + + P
Sbjct: 288 ELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPN 347
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IPPRGLKM+A
Sbjct: 348 NVKTAVCDIPPRGLKMSA 365
Score = 172 bits (419), Expect = 2e-43
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSGMGTLLISKIREEYPDRIM++ SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CI
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCI 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLNH 255
DNEALYDICFRTLKLS PTYGDLNH
Sbjct: 203 DNEALYDICFRTLKLSNPTYGDLNH 227
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 122 bits (293), Expect = 3e-28
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CI
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCI 202
Query: 181 DNEALYDICFRTLKL-STPTYGDLNH 255
DNEA++DIC LKL + TYGDLNH
Sbjct: 203 DNEAIFDICQYNLKLENRVTYGDLNH 228
Score = 88.2 bits (209), Expect = 5e-18
Identities = 50/138 (36%), Positives = 72/138 (52%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L SL +SG+TT RF G L D+RKL N PRLHFFM FAP+ +G +A ++
Sbjct: 229 LASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSIS 286
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
+LTQQ+ DAKN+M C+ G++L+S ++ + ++ P P
Sbjct: 287 DLTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPK 345
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IP RGLK +A
Sbjct: 346 STNTDVCDIPSRGLKTSA 363
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 122 bits (293), Expect = 3e-28
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG+G+LLISK+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CI
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCI 202
Query: 181 DNEALYDICFRTLKL-STPTYGDLNH 255
DNEA++DIC LKL + TYGDLNH
Sbjct: 203 DNEAIFDICQYNLKLENRVTYGDLNH 228
Score = 88.2 bits (209), Expect = 5e-18
Identities = 50/138 (36%), Positives = 72/138 (52%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L SL +SG+TT RF G L D+RKL N PRLHFFM FAP+ +G +A ++
Sbjct: 229 LASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSIS 286
Query: 435 ELTQQMFDAKNMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTPHTSWNGSPT 614
+LTQQ+ DAKN+M C+ G++L+S ++ + ++ P P
Sbjct: 287 DLTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPK 345
Query: 615 T*RPPCATIPPRGLKMAA 668
+ IP RGLK +A
Sbjct: 346 STNTDVCDIPSRGLKTSA 363
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG ++L+ ++ EY + S+ P+P++S +VVEPYN+ L+ H +E++D ++ +
Sbjct: 142 TGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMV 201
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L++S PTY +LN
Sbjct: 202 DNEAIYDICRRNLRVSRPTYNNLN 225
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S S + L+V
Sbjct: 227 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLIS--SAHHEFLSVD 284
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T+ F+A N M CDP+HG+Y+
Sbjct: 285 EITKSCFEASNQMVKCDPKHGKYM 308
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V + +I+ + S FV+W P K +
Sbjct: 310 VCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGL 350
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 87.4 bits (207), Expect = 8e-18
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V
Sbjct: 228 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVS 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 288 DITNSCFEPANQMVKCDPRHGKYM 311
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 203 DNEAIYDICRRNLDVERPSYTNLN 226
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 313 VCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V
Sbjct: 228 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVN 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 288 DITNSCFEPANQMVKCDPRHGKYM 311
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 203 DNEAIYDICRRNLSVDRPSYTNLN 226
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 313 VCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V
Sbjct: 228 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVN 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 288 DITNSCFEPANQMVKCDPRHGKYM 311
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+V VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 203 DNEAIYDICRRNLSVDRPSYTNLN 226
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 313 VCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 87.4 bits (207), Expect = 8e-18
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V
Sbjct: 228 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVS 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPRHG+Y+
Sbjct: 288 DITNSCFEPANQMVKCDPRHGKYM 311
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 203 DNEAIYDICRRNLDVERPSYTNLN 226
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 313 VCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ EY + ++ P+P+VS ++VEPYN+ L H +E++D T+ +
Sbjct: 151 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMV 210
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L L+ PTY +LN
Sbjct: 211 DNEAIYDICRRNLDLARPTYTNLN 234
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S + TV
Sbjct: 236 LVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVS 295
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ M CDPR G+Y+
Sbjct: 296 DMTHACFEPGYQMVKCDPRRGKYM 319
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+++ + ++ K + FVEW P K +
Sbjct: 321 VCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 361
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V
Sbjct: 230 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVA 289
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 290 EITNMCFEPHNQMVKCDPRHGKYM 313
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D ++ +
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 205 DNEAIYDICRRNLDIERPSYTNLN 228
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 315 VCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V
Sbjct: 229 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVA 288
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 289 EITNMCFEPHNQMVKCDPRHGKYM 312
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D ++ +
Sbjct: 144 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 203
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 204 DNEAIYDICRRNLDIERPSYTNLN 227
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 314 VCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 354
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V
Sbjct: 230 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVA 289
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 290 EITNMCFEPHNQMVKCDPRHGKYM 313
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D ++ +
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 205 DNEAIYDICRRNLDIERPSYTNLN 228
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 315 VCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ EY + ++ P+P+VS ++VEPYN+ L H +E++D T+ +
Sbjct: 123 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMV 182
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L L+ PTY +LN
Sbjct: 183 DNEAIYDICRRNLDLARPTYTNLN 206
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S + TV
Sbjct: 208 LVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVS 267
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ M CDPR G+Y+
Sbjct: 268 DMTHACFEPGYQMVKCDPRRGKYM 291
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+++ + ++ K + FVEW P K +
Sbjct: 293 VCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 333
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 84.6 bits (200), Expect = 6e-17
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S + L+V
Sbjct: 230 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVA 289
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+T F+ N M CDPRHG+Y+
Sbjct: 290 EITNMCFEPHNQMVKCDPRHGKYM 313
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D ++ +
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 205 DNEAIYDICRRNLDIERPSYTNLN 228
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V +FRG + K+V+ + I+ K S FV+W P K +
Sbjct: 315 VCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 84.2 bits (199), Expect = 8e-17
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V
Sbjct: 228 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVN 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPR+G+Y+
Sbjct: 288 DITNSCFEPANQMVKCDPRNGKYM 311
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 203 DNEAIYDICKRNLDVDRPSYTNLN 226
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + I+ K S FV+W P K +
Sbjct: 313 VCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 84.2 bits (199), Expect = 8e-17
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L++ +S VT LRF G LN DL + N+VP+PR+HF + +AP+ S + +TV
Sbjct: 235 LIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVA 294
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
E+TQQ F+ M CDPR G+Y+
Sbjct: 295 EITQQCFEPGAQMVKCDPRRGKYM 318
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG LL+ ++ +Y + + P+P+VS ++VEPYN+ L+ H +E++D ++ +
Sbjct: 150 TGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMV 209
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L L+ PTY +LN
Sbjct: 210 DNEAIYDICRRNLDLARPTYTNLN 233
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + K+V+ + +++ K S FV+W P K +
Sbjct: 323 LYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGI 360
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 84.2 bits (199), Expect = 8e-17
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S + AL+V
Sbjct: 228 IISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVN 287
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDPR+G+Y+
Sbjct: 288 DITNSCFEPANQMVKCDPRNGKYM 311
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ +Y + S+ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YDIC R L + P+Y +LN
Sbjct: 203 DNEAIYDICKRNLDVDRPSYTNLN 226
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + I+ K S FV+W P K +
Sbjct: 313 VCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +LL+ ++ E+ + SV P+P+VS +VVEPYN+ L+ H +E +D ++ +
Sbjct: 148 TGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMV 207
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+YD+C + L + P+Y +LN
Sbjct: 208 DNEAIYDLCRQKLHVERPSYSNLN 231
Score = 78.6 bits (185), Expect = 4e-15
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V
Sbjct: 233 LIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQ 292
Query: 435 ELTQQMFDAKNMMAACDPRHGRYL 506
++T F+ N M CDP G+Y+
Sbjct: 293 DITHMCFEKANQMVKCDPSAGKYM 316
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
V ++RG + K+V+ + +++ K FV+W P K +
Sbjct: 318 VCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGI 358
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +3
Query: 228 HTHLR*P*PLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 407
+THL L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 224 YTHLN---RLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEK 280
Query: 408 RQYRALTVPELTQQMFDAKNMMAACDPRHGRYL 506
+ L+V E+T F+ + M CDPR+G+Y+
Sbjct: 281 AYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYM 313
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/84 (36%), Positives = 56/84 (66%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 180
TGSG +L++ ++ +Y + S+ P+P++S ++VEPYN+ L+ H +E++D ++ +
Sbjct: 145 TGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIM 204
Query: 181 DNEALYDICFRTLKLSTPTYGDLN 252
DNEA+Y+I L + +PTY LN
Sbjct: 205 DNEAIYEITKVNLGVRSPTYTHLN 228
Score = 31.1 bits (67), Expect = 0.74
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 518 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 631
++RG + KE++ + I+ K + FV+W P K +
Sbjct: 318 LYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGI 355
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYC 177
TGSG G+LL+ ++RE +P +++ T SV + S D VV PYN LS+ +L+EN D
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVV 206
Query: 178 IDNEALYDICFRTLKLSTPTYGDLN 252
+DN AL+ + K TPT+ +N
Sbjct: 207 LDNAALHRLAAGKFKTDTPTFDHIN 231
Score = 35.1 bits (77), Expect = 0.045
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LV+ MS T RF + +R L ++ PFP +HF +P+ R +V
Sbjct: 233 LVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVA 290
Query: 435 ELTQQMFDAKNMMAACDPR 491
++T+ + +MM + R
Sbjct: 291 DVTRFLLKPTSMMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 TGSGMGTLLISKIREEYPDRIMNT*SVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYC 177
TGSG G+LL+ ++RE +P +++ T SV + S D VV PYN LS+ +L+EN D
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVV 206
Query: 178 IDNEALYDICFRTLKLSTPTYGDLN 252
+DN AL+ + K TPT+ +N
Sbjct: 207 LDNAALHRLAAGKFKTDTPTFDHIN 231
Score = 35.1 bits (77), Expect = 0.045
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +3
Query: 255 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVP 434
LV+ MS T RF + +R L ++ PFP +HF +P+ R +V
Sbjct: 233 LVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVA 290
Query: 435 ELTQQMFDAKNMMAACDPR 491
++T+ + +MM + R
Sbjct: 291 DVTRFLLKPTSMMVSTASR 309
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 20 PSSSQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYT 199
PS++ +TPT + T +P+P T +S T + ++ T +PT +TT
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 200 TSASALSNCPHPPTVTLTISFPHNV 274
+ + PPT T+ + P V
Sbjct: 657 VTLTT-QTWTAPPTTTVKRTTPQTV 680
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 20 PSSSQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYT 199
PS++ +TPT + T +P+P T +S T + ++ T +PT +TT
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 200 TSASALSNCPHPPTVTLTISFPHNV 274
+ + PPT T+ + P V
Sbjct: 657 VTLTT-QTWTAPPTTTVKRTTPQTV 680
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 89 RPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTISFP 265
+PK T ++ T + T+ T T PT +TT TT+ + + P T T T S P
Sbjct: 82 KPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTP 140
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 158 TQTKPTASTTRLYTTSASALSNCPHPPTVTLTISFP 265
T T P STT+ +T+ SA+++ PT ++T+S P
Sbjct: 475 TATTPPGSTTQAASTTESAMASSIESPTASVTVSSP 510
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 92 PKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLT 253
P T + T ++ T + T T+P +TT TTS ++ + P T T T
Sbjct: 32 PTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTT 85
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 29 SQRSVKSTPTES*THNQ*SPRPKY-QTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTS 205
S + S PT + T + RP+ +T ++ T T+ KT T P +TTRL TT
Sbjct: 348 SIEELMSPPTTTTTLQTTTTRPQTTKTTTTPQTTTTRPQTT--KTTTTPQTTTTRLQTTR 405
Query: 206 ASALSNCPHPPTV 244
+ P PTV
Sbjct: 406 RPPIRVTPRLPTV 418
>Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical
protein T07C12.8 protein.
Length = 965
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 104 TLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTIS 259
T +++ + L S L + T PT + L TT++S S PPT T T S
Sbjct: 401 TTTTDIPLELEAKISILSSTTAPTTTAQVLTTTTSSEPSTTTTPPTTTQTSS 452
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 92 PKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTISFP 265
PK+ T + T+ T T PT +TT TT+ + + P T T T + P
Sbjct: 55 PKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTP 112
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/82 (23%), Positives = 31/82 (37%)
Frame = +2
Query: 8 PVWAPSSSQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTT 187
P +++ +T T + T + + T + T T+ T T PT +TT
Sbjct: 78 PTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTT 137
Query: 188 RLYTTSASALSNCPHPPTVTLT 253
TT + + PT T T
Sbjct: 138 ETTTTPTTTTTETTTTPTTTTT 159
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 20 PSSSQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYT 199
P S ++ T+S H S P T+ ++ T+ + + T T P +TT T
Sbjct: 313 PISGVKAKDPANTKSSAHLDNSDVPT-TTVQTSTTVPTTPSKTTATTTTTPKPTTTETAT 371
Query: 200 TSASALS-NCPHPPTVTLTISFP 265
TS+S + P TVT T + P
Sbjct: 372 TSSSTTTVTTQKPTTVTSTTTLP 394
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 89 RPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHPPTVTLTISF 262
RP ++ MR S T +T PT T R T+ + + P PP + SF
Sbjct: 793 RPYQNQQNNRKRMRTSTTTKAPRTTVPPTTVTVRTTKTTTTTTTPPPPPPVTSKKSSF 850
>Z79695-7|CAO79774.1| 291|Caenorhabditis elegans Hypothetical
protein F27D4.2b protein.
Length = 291
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 465 NMMAACDPRHGRYLTSLPSSAVACP*RRSTSKCLTSRTRTP-HTSWNGSP 611
N MAA + + S AV+ P R ++ SRTRTP TS SP
Sbjct: 198 NNMAAAMQHFNAQMAAAASVAVSTPSRNPSTSGAASRTRTPLTTSATNSP 247
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 345 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHG 497
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 345 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHG 497
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 447 QMFDAKNMMAACDPRHGRYLTS-LPSSAVACP*RRSTSKCLTSRTRTPHT-SWNGSPTT* 620
++FD +N +A+ H + + + PSS+ + ST K S T TPH + G P
Sbjct: 261 KVFDEENELAS----HVKKMHAPSPSSSASSEQSTSTGKASRSSTTTPHRFNPYGKPVAP 316
Query: 621 RPPCATIPPRGLKMA 665
PP T+ G+ MA
Sbjct: 317 APP--TMQQMGMNMA 329
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 563 LNIQNKNSSYFVEWIPNNVKTAVCDNSSSWSQD 661
LN+Q NS +EW P K A+ + ++W Q+
Sbjct: 58 LNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQN 90
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 447 QMFDAKNMMAACDPRHGRYLTS-LPSSAVACP*RRSTSKCLTSRTRTPHT-SWNGSPTT* 620
++FD +N +A+ H + + + PSS+ + ST K S T TPH + G P
Sbjct: 261 KVFDEENELAS----HVKKMHAPSPSSSASSEQSTSTGKASRSSTTTPHRFNPYGKPVAP 316
Query: 621 RPPCATIPPRGLKMA 665
PP T+ G+ MA
Sbjct: 317 APP--TMQQMGMNMA 329
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 152 LKTQTKP----TASTTRLYTTSASALSNCPHPPTVTLT 253
LKT TKP T ST R+ TT AS L P PT T
Sbjct: 107 LKTTTKPVITATRSTARITTTKASTLEP-PEAPTKAST 143
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 SSSQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFT-S*LKTQTKPTASTTRLYT 199
+S+ R++ +T T + + P+ S+ T+ ++ + S L+T TKP +TT T
Sbjct: 141 ASTARTISTTETTTSPPTT-TVTPRTTRSSTARTVATTKTSPSTLRTTTKPPTTTTIATT 199
Query: 200 TSASALSNCPHPPTVTLT 253
+ + P P T T+T
Sbjct: 200 RITTKTTTSPPPFTTTVT 217
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 89 RPKYQTLSSNHTMRLSQFTS*LKTQTKPTASTTRLYTTSASALSNCPHP 235
+ + ++L + ++ S T+ T KPT+++T+ TTS+S+ + P P
Sbjct: 657 KSRKKSLKNTPSVPTSTITTTSTTTNKPTSTSTK-QTTSSSSTEHSPSP 704
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = +2
Query: 2 PGPVWAPSSSQRSVKSTPTES*THNQ*SPRPKYQTLSSNHTMRLSQFTS*LKTQTKPTAS 181
P + + ++ ++KSTPT T P T + + T+ T T PT
Sbjct: 155 PSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 214
Query: 182 TTRLYT----TSASALSNCPHPPTVTLTI 256
TT T T+ + + + P PT T+
Sbjct: 215 TTMKSTPTTPTTPTTMKSTPTTPTTPTTM 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,350,596
Number of Sequences: 27780
Number of extensions: 396198
Number of successful extensions: 1287
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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