Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00557
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    27   0.11 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   3.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.3  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +2

Query: 410 LTMTITTPALMLHGLDIAVASYFITVYNTYARQWRMSRSKFKPDLKTRTGTSHSSILAQW 589
           LT T  TP  + +    + ++   +V  T A   R S +  KP L   TG++ S  +A  
Sbjct: 151 LTKTSPTPVSINNNTSTSSSASSPSV--TAAPHLRDSPNYIKPQLHVSTGSTSSPTIASA 208

Query: 590 TTTNS 604
           T TNS
Sbjct: 209 TYTNS 213


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 138 YGNQLQCNWS 109
           +G QL+CNWS
Sbjct: 12  FGLQLECNWS 21


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 150 TTSFDSIDLEEL 185
           TT +D+IDLEE+
Sbjct: 25  TTKYDNIDLEEI 36


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +3

Query: 495 PTPDSGE*AVVNSSPT*KPEQGRLIHRSSHNGRQQTH 605
           P     E  + N S    PEQ  LIHR  +   +  H
Sbjct: 295 PELSDSEKTLCNGSKGISPEQEELIHRLVYFQNEYEH 331


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 56  WLPDHVHQCLQY 91
           W PD  ++C+QY
Sbjct: 70  WKPDASYKCMQY 81



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 35  EDWLLHPWLPDHVHQCLQYRAV 100
           + W   P LP H +Q ++ + V
Sbjct: 289 DSWATQPVLPTHPYQMIKNQQV 310


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 56  WLPDHVHQCLQY 91
           W PD  ++C+QY
Sbjct: 70  WKPDASYKCMQY 81



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 35  EDWLLHPWLPDHVHQCLQYRAV 100
           + W   P LP H +Q ++ + V
Sbjct: 289 DSWATQPVLPTHPYQMIKNQQV 310


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 56  WLPDHVHQCLQY 91
           W PD  ++C+QY
Sbjct: 70  WKPDASYKCMQY 81



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 35  EDWLLHPWLPDHVHQCLQYRAV 100
           + W   P LP H +Q ++ + V
Sbjct: 289 DSWATQPVLPTHPYQIIKNQQV 310


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 56  WLPDHVHQCLQY 91
           W PD  ++C+QY
Sbjct: 70  WKPDASYKCMQY 81



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 35  EDWLLHPWLPDHVHQCLQYRAV 100
           + W   P LP H +Q ++ + V
Sbjct: 289 DSWATQPVLPTHPYQIIKNQLV 310


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 56  WLPDHVHQCLQY 91
           W PD  ++C+QY
Sbjct: 70  WKPDASYKCMQY 81



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 35  EDWLLHPWLPDHVHQCLQYRAV 100
           + W   P LP H +Q ++ + V
Sbjct: 289 DSWATQPVLPTHPYQIIKNKQV 310


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 394  CWFSVPDNDHHDSGLNV 444
            CW+ +    H+++G NV
Sbjct: 1558 CWYHLRVTAHNNAGFNV 1574


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = +2

Query: 245 WGRIVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGL 403
           +G +VLL+ + +    LL+ I  +V   +     + + V+F    +V  F+G+
Sbjct: 212 FGFLVLLL-VALTTLQLLIYIQVIVIGTKNTIETVAYSVIFILWHIVGTFSGI 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,941
Number of Sequences: 336
Number of extensions: 3497
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)