Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00556
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.61 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.6  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 553 RAPVHKSQIA-WLTRRRVKHQRLDDELYPHD 464
           RAPV  S  A  L ++++K QRLD+  YP++
Sbjct: 44  RAPVGLSLAASHLQQQQLKKQRLDNGDYPYE 74


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 205 REVRKIFTSFSWQVCTQRFRKAQY 276
           R+ R I++S   Q   +RF++ QY
Sbjct: 122 RKPRTIYSSLQLQQLNRRFQRTQY 145


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 643  PSKRRTSWSVLLN 681
            PSK R  W+VLLN
Sbjct: 1118 PSKIRICWNVLLN 1130


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 337 VFCHCSDRASL 305
           VFC CS +ASL
Sbjct: 298 VFCDCSHQASL 308


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 337 VFCHCSDRASL 305
           VFC CS +ASL
Sbjct: 298 VFCDCSHQASL 308


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 337 VFCHCSDRASL 305
           VFC CS +ASL
Sbjct: 298 VFCDCSHQASL 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,524
Number of Sequences: 336
Number of extensions: 3693
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)