Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00556
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   157   7e-39
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z73899-4|CAA98076.1|  400|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U64601-3|ABC71817.1|  485|Caenorhabditis elegans Temporarily ass...    28   5.8  
U64601-2|AAQ82847.1|  592|Caenorhabditis elegans Temporarily ass...    28   5.8  
U64601-1|AAB04573.2|  564|Caenorhabditis elegans Temporarily ass...    28   5.8  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  157 bits (381), Expect = 7e-39
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = +1

Query: 253 QRFRKAQYPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 432
           +RFRKA  PIVERL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV A+IN
Sbjct: 65  RRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVIN 124

Query: 433 SGPREDSTRIGRAGTVRRQAVDVSP 507
           SGPREDSTRIGRAGTVRRQAVDV+P
Sbjct: 125 SGPREDSTRIGRAGTVRRQAVDVAP 149



 Score =  124 bits (300), Expect = 5e-29
 Identities = 59/61 (96%), Positives = 61/61 (100%)
 Frame = +3

Query: 507 LRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSN 686
           LRRVNQAIWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSN
Sbjct: 150 LRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 209

Query: 687 R 689
           R
Sbjct: 210 R 210



 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = +2

Query: 110 AADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 247
           A + PE+ LFG+WS   V VSD+SL DYI VKEK AKYLPHSAGR+
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRF 62


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +1

Query: 433 SGPREDSTRIGRAGTVRRQA-VDVSPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQ 600
           S P + S + G + TV   +  + +    S  QSGF    HV++  EIL+Q+  V++
Sbjct: 149 SAPDDISVKDGESVTVLNISDPEWTYIRNSDNQSGFVPSSHVKIPHEILQQASRVIK 205


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +3

Query: 510 RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 689
           +RV   +    T    A  RN   + E  A+E I A +   N +A+K +   +  A SNR
Sbjct: 474 QRVQDTVQKARTAVGYAGTRNRSPLREADAEE-IAATEALKNRFAVKSRGTAKAKANSNR 532

Query: 690 *NILLSHL 713
              LL  +
Sbjct: 533 GAALLESI 540


>Z73899-4|CAA98076.1|  400|Caenorhabditis elegans Hypothetical
           protein ZK829.6 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -2

Query: 637 ELDEPLAALINSSATHSAIVLIFLNAASRAPVHKSQIAWLTRRRVKHQRLDDELYP 470
           E+ + L A I     H   VL   +    A +H+S I WL R +V H R D  ++P
Sbjct: 129 EIQQALGADIMMQLDHVIHVLTTGDIVKEA-MHRS-IRWLDRCKVAHTRDDQAMFP 182


>U64601-3|ABC71817.1|  485|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 126, isoform c protein.
          Length = 485

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 335 FLPLFRPCIIREFVRRSTIGYWALRKRCVHTCQLNEVNILRTS 207
           +  +FR    RE + R ++G   L  R   T Q N+ N LRT+
Sbjct: 180 YFKIFRVASEREALMRQSVGTCRLSNRLTKTQQKNQRNNLRTA 222


>U64601-2|AAQ82847.1|  592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 126, isoform b protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 335 FLPLFRPCIIREFVRRSTIGYWALRKRCVHTCQLNEVNILRTS 207
           +  +FR    RE + R ++G   L  R   T Q N+ N LRT+
Sbjct: 287 YFKIFRVASEREALMRQSVGTCRLSNRLTKTQQKNQRNNLRTA 329


>U64601-1|AAB04573.2|  564|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 126, isoform a protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 335 FLPLFRPCIIREFVRRSTIGYWALRKRCVHTCQLNEVNILRTS 207
           +  +FR    RE + R ++G   L  R   T Q N+ N LRT+
Sbjct: 259 YFKIFRVASEREALMRQSVGTCRLSNRLTKTQQKNQRNNLRTA 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,544,241
Number of Sequences: 27780
Number of extensions: 354551
Number of successful extensions: 1106
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)