Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00555
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 89 1e-17
BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 89 1e-17
AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein. 89 1e-17
CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein. 86 1e-16
BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified ... 86 1e-16
BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified ... 86 1e-16
BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein. 86 1e-16
BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein. 86 1e-16
AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein. 86 1e-16
AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein. 86 1e-16
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 32 1.7
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 32 1.7
BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 32 1.7
AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 32 1.7
AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens ... 32 1.7
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein. 32 2.2
BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (min... 32 2.2
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein. 32 2.2
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit... 32 2.2
AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein. 32 2.2
>BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 89.0 bits (211), Expect = 1e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W + R NIYE+R+Y LKPGTMIEWGNNWAR + YR+ EA G+FSQI
Sbjct: 166 LLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQI 225
Query: 668 GRLY 679
G LY
Sbjct: 226 GELY 229
Score = 58.0 bits (134), Expect = 3e-08
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 309 CELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQ 488
C LVG+W G+ DQA+HL+++ GG+ + K + Y ER +M+ SR Q
Sbjct: 106 CSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERSQMLLSRRNQ 165
Query: 489 YLLAFSF 509
LL FSF
Sbjct: 166 LLLEFSF 172
Score = 50.8 bits (116), Expect = 4e-06
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKITSSM 273
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y +T ++
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAV 94
>BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 89.0 bits (211), Expect = 1e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W + R NIYE+R+Y LKPGTMIEWGNNWAR + YR+ EA G+FSQI
Sbjct: 166 LLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQI 225
Query: 668 GRLY 679
G LY
Sbjct: 226 GELY 229
Score = 58.0 bits (134), Expect = 3e-08
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 309 CELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQ 488
C LVG+W G+ DQA+HL+++ GG+ + K + Y ER +M+ SR Q
Sbjct: 106 CSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERSQMLLSRRNQ 165
Query: 489 YLLAFSF 509
LL FSF
Sbjct: 166 LLLEFSF 172
Score = 50.8 bits (116), Expect = 4e-06
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKITSSM 273
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y +T ++
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAV 94
>AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein.
Length = 284
Score = 89.0 bits (211), Expect = 1e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W + R NIYE+R+Y LKPGTMIEWGNNWAR + YR+ EA G+FSQI
Sbjct: 166 LLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQI 225
Query: 668 GRLY 679
G LY
Sbjct: 226 GELY 229
Score = 57.2 bits (132), Expect = 5e-08
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 309 CELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQ 488
C LVG+W G+ DQA+HL+++ GG+ + K + Y ER +M+ SR Q
Sbjct: 106 CSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERTQMLLSRRNQ 165
Query: 489 YLLAFSF 509
LL FSF
Sbjct: 166 LLLEFSF 172
Score = 50.8 bits (116), Expect = 4e-06
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKITSSM 273
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y +T ++
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAV 94
>CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 168 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 227
Query: 668 GRLY 679
G+LY
Sbjct: 228 GQLY 231
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 100 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 158
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 159 DMLLSRKNQLLLEFSF 174
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 85 CLEAYNKI 92
>BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 168 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 227
Query: 668 GRLY 679
G+LY
Sbjct: 228 GQLY 231
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 100 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 158
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 159 DMLLSRKNQLLLEFSF 174
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 85 CLEAYNKI 92
>BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 168 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 227
Query: 668 GRLY 679
G+LY
Sbjct: 228 GQLY 231
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 100 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 158
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 159 DMLLSRKNQLLLEFSF 174
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 85 CLEAYNKI 92
>BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 168 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 227
Query: 668 GRLY 679
G+LY
Sbjct: 228 GQLY 231
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 100 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 158
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 159 DMLLSRKNQLLLEFSF 174
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 85 CLEAYNKI 92
>BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 168 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 227
Query: 668 GRLY 679
G+LY
Sbjct: 228 GQLY 231
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 100 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 158
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 159 DMLLSRKNQLLLEFSF 174
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 85 CLEAYNKI 92
>AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein.
Length = 285
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 167 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 226
Query: 668 GRLY 679
G+LY
Sbjct: 227 GQLY 230
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 99 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 157
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 158 DMLLSRKNQLLLEFSF 173
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 25 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 83
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 84 CLEAYNKI 91
>AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
+L F W RS NIYE+RSY L+PGTMIEWGN WAR + +R+ NEA G+FSQI
Sbjct: 168 LLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNEAVGGFFSQI 227
Query: 668 GRLY 679
G+LY
Sbjct: 228 GQLY 231
Score = 56.4 bits (130), Expect = 9e-08
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 282 IHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
IH K C LVG+W G+ DQA+HL++Y GG+ + + +++ + R
Sbjct: 100 IHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARS 158
Query: 462 KMVRSRHLQYLLAFSF 509
M+ SR Q LL FSF
Sbjct: 159 DMLLSRKNQLLLEFSF 174
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 237
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 238 SVDNYLKI 261
++ Y KI
Sbjct: 85 CLEAYNKI 92
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 394 FSNP--PTYLNKCRAWSISPTDTVHDPTSSQPSSALCECI 281
F NP P +KC+A + +P T+ +S P + CEC+
Sbjct: 869 FGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECL 908
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 394 FSNP--PTYLNKCRAWSISPTDTVHDPTSSQPSSALCECI 281
F NP P +KC+A + +P T+ +S P + CEC+
Sbjct: 869 FGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECL 908
>BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 545 YEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFS 661
YE RSY LKP M E+ N+ + R A +E GY+S
Sbjct: 37 YEFRSYYLKPSKMNEFLENFEKNAHLRTAHSE-LVGYWS 74
>AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 545 YEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFS 661
YE RSY LKP M E+ N+ + R A +E GY+S
Sbjct: 37 YEFRSYYLKPSKMNEFLENFEKNAHLRTAHSE-LVGYWS 74
>AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13953 fis, clone Y79AA1001078. ).
Length = 247
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 545 YEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFS 661
YE RSY LKP M E+ N+ + R A +E GY+S
Sbjct: 37 YEFRSYYLKPSKMNEFLENFEKNAHLRTAHSE-LVGYWS 74
>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
Length = 1165
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 291 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 637 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 693
>BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (minor)
HA-1 protein.
Length = 1136
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 291 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 608 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
Length = 1131
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 291 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 603 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 659
>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
antigen HA-1 protein.
Length = 1136
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 291 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 608 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein.
Length = 996
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 291 HKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERG 461
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 468 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 524
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,667,113
Number of Sequences: 237096
Number of extensions: 2290875
Number of successful extensions: 4324
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4311
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -