Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00555
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 84 8e-17
L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical pr... 84 8e-17
AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPS... 84 8e-17
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 30 1.3
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.8
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.8
AL032627-12|CAB63357.1| 577|Caenorhabditis elegans Hypothetical... 29 2.3
U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 28 5.4
AY204183-1|AAO39187.1| 406|Caenorhabditis elegans nuclear recep... 28 5.4
AL132948-14|CAD91709.1| 399|Caenorhabditis elegans Hypothetical... 28 5.4
AL132948-13|CAD31815.2| 509|Caenorhabditis elegans Hypothetical... 28 5.4
AF273839-1|AAG15186.1| 470|Caenorhabditis elegans nuclear recep... 28 5.4
AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 28 5.4
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine re... 28 5.4
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 28 7.1
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 27 9.4
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 27 9.4
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 84.2 bits (199), Expect = 8e-17
Identities = 32/64 (50%), Positives = 47/64 (73%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
I+ SF W E R PN++Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+
Sbjct: 408 IVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQV 467
Query: 668 GRLY 679
G+LY
Sbjct: 468 GQLY 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 ELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQ 488
ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++ K+ R
Sbjct: 348 ELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDVAKLCGRRKNL 407
Query: 489 YLLAFSF 509
+ +FS+
Sbjct: 408 IVKSFSY 414
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Frame = +1
Query: 121 GWFSKLLV-RRIEPT---KESHSRMLSDKEVIYALHTHNIRPDSVDNYL 255
GW S+LL + ++P+ K+SHS +LS+ E++Y THN RP D YL
Sbjct: 282 GWISRLLKGQSMDPSSWQKQSHSSLLSNSELMYEFMTHNYRPGEQDAYL 330
>L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical
protein K02D10.1b protein.
Length = 289
Score = 84.2 bits (199), Expect = 8e-17
Identities = 32/64 (50%), Positives = 47/64 (73%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
I+ SF W E R PN++Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+
Sbjct: 171 IVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQV 230
Query: 668 GRLY 679
G+LY
Sbjct: 231 GQLY 234
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 ELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQ 488
ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++ K+ R
Sbjct: 111 ELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDVAKLCGRRKNL 170
Query: 489 YLLAFSF 509
+ +FS+
Sbjct: 171 IVKSFSY 177
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Frame = +1
Query: 121 GWFSKLLV-RRIEPT---KESHSRMLSDKEVIYALHTHNIRPDSVDNYL 255
GW S+LL + ++P+ K+SHS +LS+ E++Y THN RP D YL
Sbjct: 45 GWISRLLKGQSMDPSSWQKQSHSSLLSNSELMYEFMTHNYRPGEQDAYL 93
>AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPSNAP
protein protein.
Length = 231
Score = 84.2 bits (199), Expect = 8e-17
Identities = 32/64 (50%), Positives = 47/64 (73%)
Frame = +2
Query: 488 ILASFQLWPAGEARSPNNIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 667
I+ SF W E R PN++Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+
Sbjct: 113 IVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQV 172
Query: 668 GRLY 679
G+LY
Sbjct: 173 GQLY 176
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 312 ELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESERGKMVRSRHLQ 488
ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++ K+ R
Sbjct: 53 ELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDVAKLCGRRKNL 112
Query: 489 YLLAFSF 509
+ +FS+
Sbjct: 113 IVKSFSY 119
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 163 KESHSRMLSDKEVIYALHTHNIRPDSVDNYL 255
K+SHS +LS+ E++Y THN RP D YL
Sbjct: 5 KQSHSSLLSNSELMYEFMTHNYRPGEQDAYL 35
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/104 (18%), Positives = 51/104 (49%)
Frame = +3
Query: 225 HKTGFSGQLFKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDK 404
HK+ G+ K YK ++ +++ + +G +++G ++ G DQ + + +
Sbjct: 189 HKSAILGEFGKGYKYAIEYLNAGRIGIGAQMLG---LAQGCFDQTI---------PYLQQ 236
Query: 405 AKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFGQLEKHGLP 536
+Q ++ +Q ++ + ++ LL ++ ++++HGLP
Sbjct: 237 REQFGQRIIDFQGMQHQIAQVRTEIEAARLLVYNAARMKQHGLP 280
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 322 DHGQYQLEIWTKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 444
D +++ W K ++ + K+ T PNN K+++ NC
Sbjct: 2590 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2630
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 322 DHGQYQLEIWTKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 444
D +++ W K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 322 DHGQYQLEIWTKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 444
D +++ W K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 322 DHGQYQLEIWTKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 444
D +++ W K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>AL032627-12|CAB63357.1| 577|Caenorhabditis elegans Hypothetical
protein Y41C4A.9 protein.
Length = 577
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 393 KIDKAKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFGQLEKHGL 533
K+D+A+++F + L+ +ER RHL + F QL H L
Sbjct: 475 KVDRAREMFFHERKSYLVVTERWYFFNRRHLTGVHRVVFYQLPSHPL 521
>U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of
potassium channelsprotein 16 protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 433 LESCLNNCLALSIFSNPPTYLNKCRAWSISPTDTVHDPTSSQPSS 299
LE+ + +A+ PP LN SP +H P S++PS+
Sbjct: 327 LENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSN 371
>AY204183-1|AAO39187.1| 406|Caenorhabditis elegans nuclear receptor
NHR-95 protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 648 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 547
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 151 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 184
>AL132948-14|CAD91709.1| 399|Caenorhabditis elegans Hypothetical
protein Y39B6A.17b protein.
Length = 399
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 648 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 547
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 144 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 177
>AL132948-13|CAD31815.2| 509|Caenorhabditis elegans Hypothetical
protein Y39B6A.17a protein.
Length = 509
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 648 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 547
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 144 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 177
>AF273839-1|AAG15186.1| 470|Caenorhabditis elegans nuclear receptor
NHR-95 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 648 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 547
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 105 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 138
>AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium
channel subunit n2P16 protein.
Length = 555
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 433 LESCLNNCLALSIFSNPPTYLNKCRAWSISPTDTVHDPTSSQPSS 299
LE+ + +A+ PP LN SP +H P S++PS+
Sbjct: 327 LENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSN 371
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/104 (18%), Positives = 51/104 (49%)
Frame = +3
Query: 225 HKTGFSGQLFKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDK 404
HK+ G+ K YK ++ +++ + +G +++G ++ G DQ + + +
Sbjct: 254 HKSSILGEYGKGYKYAIECLNAGRIGIGAQMLG---LAQGCFDQTI---------PYLQQ 301
Query: 405 AKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFGQLEKHGLP 536
+Q ++ +Q ++ + G+ LL ++ +++++GLP
Sbjct: 302 REQFGQRLIDFQGMQHQIGQTRMEIEAARLLVYNAARMKQNGLP 345
>AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform b protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 85 VISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIYALHT 219
V+ AL+ W LL+RR+ K S R+ + + + A+H+
Sbjct: 2 VVFPIALIGVMANWTVALLIRRLPSLKNSFGRLTASQSIGDAIHS 46
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 109 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIYALHTHNI 228
NT+ + + +E K+ H ML+DK V +H H++
Sbjct: 579 NTEGQQGNSKMKANLETIKDIHKAMLADKHVEAHIHEHDV 618
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/104 (20%), Positives = 56/104 (53%)
Frame = +3
Query: 225 HKTGFSGQLFKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFKYVGGFEKIDK 404
HK+ G+ K YK ++ +++ + +G +++G ++ G DQ + Y+ E+ +
Sbjct: 262 HKSAILGEYGKGYKYAIECLNAGRIAIGAQMIG---LAQGCFDQTI---PYLQQREQFGQ 315
Query: 405 AKQLFKQDSSYQLLESERGKMVRSRHLQYLLAFSFGQLEKHGLP 536
+ + Q +Q+ ++ R ++ +R LL ++ +++++G+P
Sbjct: 316 -RLIDFQGLQHQIAQA-RTEIEAAR----LLVYNAARMKEYGIP 353
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Frame = -2
Query: 349 ISPTDT--VHDPTSSQPSSALCECIRSTCCL*FLNSCP------LNPV----LCCVYEEH 206
+SPT T + D T PS+ +C + CC L +CP +N + + C +++
Sbjct: 102 LSPTGTLTICDLTEDCPSTHICNPVHGVCCT-KLPTCPKTKKTMVNFITGKPIMCQFKQG 160
Query: 205 KLLPC 191
+++PC
Sbjct: 161 RVMPC 165
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +3
Query: 225 HKTGFSGQLFKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQAL 362
HK+ G+ K YK ++ +++ + +G +++G ++ G DQ +
Sbjct: 169 HKSAILGEYGKGYKYAIECLNAGRIAIGAQMIG---LAQGCFDQTI 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,188,975
Number of Sequences: 27780
Number of extensions: 355726
Number of successful extensions: 958
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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