Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00554X
(457 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 138 2e-33
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 2e-33
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 138 2e-33
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 138 3e-33
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 136 8e-33
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 2e-32
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 2e-32
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 133 8e-32
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 8e-32
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 9e-27
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 3e-25
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 2e-23
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 102 1e-22
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 88 3e-18
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 77 5e-15
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 77 5e-15
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 77 7e-15
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 75 4e-14
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 66 2e-11
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.007
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 31 0.34
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 3.2
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 28 3.2
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 27 7.4
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 27 9.7
SB_42047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_6620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_9690| Best HMM Match : PPR (HMM E-Value=7.7) 27 9.7
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 138 bits (335), Expect = 2e-33
Identities = 65/79 (82%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG+EIV L LDRIRKLAD
Sbjct: 173 TIGKEIVDLVLDRIRKLAD 191
Score = 137 bits (331), Expect = 5e-33
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+E++ L LDRIRKLAD
Sbjct: 694 TVGKELIDLVLDRIRKLAD 712
Score = 135 bits (326), Expect = 2e-32
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +2
Query: 71 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 250
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 251 GSTYP 265
G P
Sbjct: 123 GKHVP 127
Score = 134 bits (324), Expect = 3e-32
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 257 TYP 265
P
Sbjct: 646 HVP 648
Score = 134 bits (323), Expect = 4e-32
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 260 YP 265
P
Sbjct: 574 VP 575
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTV 297
F F + +HVPRAVF DLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 138 bits (334), Expect = 2e-33
Identities = 63/79 (79%), Positives = 69/79 (87%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+E++ L LDRIRKLAD
Sbjct: 913 TVGKEMIDLVLDRIRKLAD 931
Score = 133 bits (321), Expect = 8e-32
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 260 YP 265
P
Sbjct: 866 VP 867
Score = 132 bits (320), Expect = 1e-31
Identities = 59/79 (74%), Positives = 67/79 (84%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+E + + LDR+RKLAD
Sbjct: 480 TVGKEQIDIVLDRLRKLAD 498
Score = 131 bits (317), Expect = 2e-31
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAG
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 260 YP 265
P
Sbjct: 433 VP 434
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 138 bits (334), Expect = 2e-33
Identities = 64/79 (81%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+EIV L LDRIRKLAD
Sbjct: 542 TVGKEIVDLVLDRIRKLAD 560
Score = 138 bits (333), Expect = 3e-33
Identities = 63/79 (79%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+EIV L LDRIRKLAD
Sbjct: 109 TVGKEIVDLVLDRIRKLAD 127
Score = 136 bits (328), Expect = 1e-32
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
Score = 134 bits (323), Expect = 4e-32
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 260 YP 265
P
Sbjct: 495 VP 496
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 138 bits (333), Expect = 3e-33
Identities = 63/79 (79%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+EI+ L LDRIRKLAD
Sbjct: 108 TVGKEIIDLVLDRIRKLAD 126
Score = 134 bits (323), Expect = 4e-32
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 260 YP 265
P
Sbjct: 61 VP 62
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 136 bits (329), Expect = 8e-33
Identities = 63/79 (79%), Positives = 67/79 (84%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG+EI+ L LDR RKLAD
Sbjct: 109 TIGKEIIDLVLDRCRKLAD 127
Score = 134 bits (325), Expect = 2e-32
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 135 bits (326), Expect = 2e-32
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F S +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+E++ LDR+RKLAD
Sbjct: 109 TVGKEMIDTVLDRLRKLAD 127
Score = 134 bits (323), Expect = 4e-32
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 134 bits (325), Expect = 2e-32
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G++++ + LDR+RKLAD
Sbjct: 94 TVGKQLIEIVLDRLRKLAD 112
Score = 132 bits (319), Expect = 1e-31
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 259
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 260 YP 265
P
Sbjct: 480 VP 481
Score = 128 bits (310), Expect = 2e-30
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G++ + LDRIRKLAD
Sbjct: 527 TVGKDHIDNVLDRIRKLAD 545
Score = 103 bits (248), Expect = 5e-23
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +2
Query: 122 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 265
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAG P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 133 bits (321), Expect = 8e-32
Identities = 57/63 (90%), Positives = 59/63 (93%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
Score = 90.6 bits (215), Expect = 5e-19
Identities = 48/79 (60%), Positives = 53/79 (67%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG++ V LDR+RKLAD
Sbjct: 99 TIGKQQVDQVLDRLRKLAD 117
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 133 bits (321), Expect = 8e-32
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+E + LALDRIRKLAD
Sbjct: 74 TVGKEHIDLALDRIRKLAD 92
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 182 MPTDKTIGGGDDSFNTFFSETGAGSTYP 265
MP+DKTIGGGDDSFNTFF+ETGAG P
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 132 bits (318), Expect = 2e-31
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVR 312
F F +HVPRAVF DLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 116 bits (279), Expect = 9e-27
Identities = 49/68 (72%), Positives = 61/68 (89%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIG+E+V + +
Sbjct: 971 KYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVM 1030
Query: 433 DRIRKLAD 456
D+IRK+ D
Sbjct: 1031 DKIRKMTD 1038
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 111 bits (266), Expect = 3e-25
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 253
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +G
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASG 254
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 105 bits (252), Expect = 2e-23
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +1
Query: 295 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDRIRKLAD 456
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G+E++ L LDRIRKLAD
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 64
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 102 bits (245), Expect = 1e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDRIRKLAD 456
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G+E++ L LDRIRKLAD
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 52
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 99.5 bits (237), Expect = 1e-21
Identities = 43/51 (84%), Positives = 49/51 (96%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDRIRKLAD 456
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+G+E + LALDRIRKLAD
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 52
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDRIRKL 450
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G+E++ L LDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 88.2 bits (209), Expect = 3e-18
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDRIRKL 450
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+G+E + L L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 77.4 bits (182), Expect = 5e-15
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V L
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 62
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 63 DVVRKEAE 70
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 77.4 bits (182), Expect = 5e-15
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V L
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 331 DVVRKEAE 338
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = +2
Query: 62 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 241
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 242 TGAGSTYP 265
G P
Sbjct: 267 ATGGKYVP 274
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 77.0 bits (181), Expect = 7e-15
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V L
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 117
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 118 DVVRKEAE 125
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 74.5 bits (175), Expect = 4e-14
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPR+V DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 58 KYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVL 117
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 118 DVVRKEAE 125
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPR++ DLEP +D VR G +F P+ + + AANN+A+GHY+ G E++
Sbjct: 14 RYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIF 73
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 74 DVLRKEAE 81
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLI 354
++VPRA+ DLEP +D VR+G + Q+F P+ +
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 361 KEDAANNYARGHYTIGQEIVHLALDRIRKLAD 456
+ AANN+A+G YT G E++ +D IRKLA+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAE 33
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 31.5 bits (68), Expect = 0.34
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 265 RAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 384
RAV D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 137 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 241
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 306 GPHWHIQTVVSSRTTYYW*GRRGQQLCPWSLHHWTGN 416
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 306 GPHWHIQTVVSSRTTYYW*GRRGQQLCPWSLHHWTGN 416
G HW+ T + + +W G G + W HW N
Sbjct: 258 GKHWYGNTGMETLGQKHWYGNTGMKTLVWK--HWDKN 292
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 262 PRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTI 405
P V+ L T VD+V+TG PEQL+ K++A+ RG + +
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQL 169
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 187 HRQDHRGRRRFFQHFLQRDRSWQHVPRAVFA--DLEPTVVDEVRTGTYRQLF 336
H+ +HRG F R VPR + A +PTV +V+ T + +
Sbjct: 4441 HKNNHRGSHGHVGRFNNRPTQRHSVPRQIIAHPTEQPTVTPDVKQITLNKTY 4492
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 183 CPQTRPSGAETILSTLSSARPELAARTP 266
CP RPSG T SA+P+ A R P
Sbjct: 476 CPTLRPSGFGDNTCTQPSAKPKPAPRPP 503
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQP 172
+ C S + +GV+ G W L + GIQP
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQP 267
>SB_42047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 715
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 391 GHYTIGQEIVHLALDRIRKLA 453
GH+ G E +HLAL RKLA
Sbjct: 80 GHFVSGSESLHLALLHPRKLA 100
>SB_6620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 182 MPTDKTIGGGDDSFNTFFSETGAGSTYPVL 271
+ D TI DD +N + AGS YP++
Sbjct: 683 LKADYTINCFDDRYNKYVKFAYAGSVYPII 712
>SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 46 HLSIEKNSNQNA*VHLCTRWPSRSPDR*CLLGALLP 153
HLS E Q V+ C RW R P C + +++P
Sbjct: 466 HLSREVGRGQYGVVYACDRWAGRHP---CAIKSVVP 498
>SB_9690| Best HMM Match : PPR (HMM E-Value=7.7)
Length = 258
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -2
Query: 342 WMKQLSVCASADLINNSRFKIGEDSTGYVLPAPVSLKKVLKESSPPPMVLSVG 184
W K + IN++ +GE STG VL + LK P P +G
Sbjct: 44 WTKVFAKLVLEGQINSALRFLGETSTGGVLDLTDDVMDQLKAKHPDPQPAKLG 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,218,407
Number of Sequences: 59808
Number of extensions: 331776
Number of successful extensions: 924
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -