Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00554X
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    56   8e-10
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    28   0.031
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    25   1.7  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    25   1.7  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    25   1.7  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    25   1.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.7  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    23   6.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.7  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 55.6 bits (128), Expect = 8e-10
 Identities = 34/86 (39%), Positives = 37/86 (43%)
 Frame = +2

Query: 77  MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
           MRECISVHVGQAGVQIGN CW+            + P  +                   S
Sbjct: 1   MRECISVHVGQAGVQIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQAS 60

Query: 257 TYPVLSSPIXXXXXXMRSALAHTDSC 334
           T PV  S I      MR A A T SC
Sbjct: 61  TCPVPCSSIWSRPSSMRCAPARTASC 86


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 27.9 bits (59), Expect(2) = 0.031
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 183 CPQTRPSGAETILSTLSSARPELAARTPCCLR 278
           C   RPS  +   ++ S  RP+LAA +  C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195



 Score = 21.0 bits (42), Expect(2) = 0.031
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 126 VMPAGSFTAWSTA 164
           V+ AG F AW TA
Sbjct: 116 VLLAGDFNAWHTA 128


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 394 HYTIGQEIVHLALDRIRK 447
           HYT G E+V   LD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 394 HYTIGQEIVHLALDRIRK 447
           HYT G E+V   LD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 394 HYTIGQEIVHLALDRIRK 447
           HYT G E+V   LD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 394 HYTIGQEIVHLALDRIRK 447
           HYT G E+V   LD +RK
Sbjct: 1   HYTEGAELVDAVLDVVRK 18


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 194  KTIGGGDDSFNTFFSETGAGSTYPVLSSP 280
            +TIG  ++SF+++ SET   ++ P+  SP
Sbjct: 1082 QTIGAREESFSSYRSETEPDNS-PMGGSP 1109


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 177 ARCPQTRPSGAETILST 227
           A CP+TR + AET  ST
Sbjct: 76  AYCPRTRSACAETFPST 92


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 106  PSRSPDR*CLLGALLPGARHPA*WPDAHRQDHR 204
            P+  P +  L+  +LP +  PA  P   R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,571
Number of Sequences: 2352
Number of extensions: 10247
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)