Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00554X
(457 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 135 2e-32
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 135 2e-32
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 135 2e-32
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 135 2e-32
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 134 3e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 134 3e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 133 6e-32
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 80 8e-16
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 78 2e-15
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 78 2e-15
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 77 6e-15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 77 8e-15
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 75 2e-14
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 75 2e-14
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 75 3e-14
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 75 3e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 48 4e-06
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 48 4e-06
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 1.5
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 28 2.6
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 2.6
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 28 3.4
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 6.0
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 27 6.0
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 27 6.0
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 27 6.0
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 27 6.0
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 27 7.9
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 27 7.9
At3g19180.1 68416.m02435 cell division protein-related weak simi... 27 7.9
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 7.9
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 7.9
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 2e-32
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG+EIV L LDRIRKLAD
Sbjct: 109 TIGKEIVDLCLDRIRKLAD 127
Score = 132 bits (318), Expect = 1e-31
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 135 bits (326), Expect = 2e-32
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG+EIV L LDRIRKLAD
Sbjct: 109 TIGKEIVDLCLDRIRKLAD 127
Score = 132 bits (318), Expect = 1e-31
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 135 bits (326), Expect = 2e-32
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG+EIV L LDRIRKLAD
Sbjct: 109 TIGKEIVDLCLDRIRKLAD 127
Score = 133 bits (321), Expect = 6e-32
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 135 bits (326), Expect = 2e-32
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
TIG+EIV L LDRIRKLAD
Sbjct: 109 TIGKEIVDLCLDRIRKLAD 127
Score = 133 bits (321), Expect = 6e-32
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 134 bits (324), Expect = 3e-32
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+EIV L LDR+RKLAD
Sbjct: 109 TVGKEIVDLCLDRVRKLAD 127
Score = 114 bits (275), Expect = 2e-26
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 134 bits (324), Expect = 3e-32
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F + +HVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+EIV L LDR+RKLAD
Sbjct: 109 TVGKEIVDLCLDRVRKLAD 127
Score = 114 bits (275), Expect = 2e-26
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 6e-32
Identities = 60/79 (75%), Positives = 67/79 (84%)
Frame = +1
Query: 220 FQHFLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 399
F F S QHVPRAVF DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 400 TIGQEIVHLALDRIRKLAD 456
T+G+EIV L+R+RKLAD
Sbjct: 109 TVGREIVDTCLERLRKLAD 127
Score = 111 bits (266), Expect = 3e-25
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 257 TYP 265
P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 79.8 bits (188), Expect = 8e-16
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRA+ DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 118 DVVRKEAE 125
Score = 46.8 bits (106), Expect = 7e-06
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 247
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 248 AGSTYP 265
G P
Sbjct: 56 CGRYVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 118 DVVRKEAE 125
Score = 43.2 bits (97), Expect = 9e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 78.2 bits (184), Expect = 2e-15
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 119 DVVRKEAE 126
Score = 46.8 bits (106), Expect = 7e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 257 TYP 265
P
Sbjct: 60 YVP 62
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 77.0 bits (181), Expect = 6e-15
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +1
Query: 259 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDR 438
VPRAV DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ LD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 439 IRKLAD 456
+RK A+
Sbjct: 120 VRKEAE 125
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 FVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 76.6 bits (180), Expect = 8e-15
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 119 DVVRKEAE 126
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 257 TYP 265
P
Sbjct: 60 YVP 62
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 75.4 bits (177), Expect = 2e-14
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 118 DVVRKEAE 125
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 75.4 bits (177), Expect = 2e-14
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1
Query: 253 QHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLAL 432
++VPRAV DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ L
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 433 DRIRKLAD 456
D +RK A+
Sbjct: 118 DVVRKEAE 125
Score = 46.4 bits (105), Expect = 9e-06
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 257 TYP 265
P
Sbjct: 59 YVP 61
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 74.5 bits (175), Expect = 3e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +1
Query: 259 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDR 438
VPRAV DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ LD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 439 IRKLAD 456
+RK A+
Sbjct: 120 VRKEAE 125
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 74.5 bits (175), Expect = 3e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +1
Query: 259 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALDR 438
VPRAV DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ LD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 439 IRKLAD 456
+RK A+
Sbjct: 120 VRKEAE 125
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 256
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 257 TYP 265
P
Sbjct: 59 FVP 61
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 47.2 bits (107), Expect = 5e-06
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 402
F Q D ++PRA+ DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 403 IGQEIVHLALDRIRKLAD 456
G+ + +D I + AD
Sbjct: 111 -GKGVEEEIMDMIDREAD 127
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 47.6 bits (108), Expect = 4e-06
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 FLQRDRSWQHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 402
F Q D ++PRA+ DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 403 IGQEIVHLALDRIRKLAD 456
G+ + +D I + AD
Sbjct: 111 -GKGVEEEIMDMIDREAD 127
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 246 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 121
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 72 SKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGAETIL 221
SKC+SAS+ L + +M + S T A L+ RC Q + GAE L
Sbjct: 550 SKCMSASMPILVQ-----LMASSSATDVENAILLLMRCKQFQIDGAEACL 594
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 300 NNSRFKIGEDSTGYVLPAPVSLKKVLKESSPPPM 199
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 315 SADLINNSRFKIGEDSTGYVLPAPVSLKKVLKESSPPP 202
SA++ N RFK G + T A +++ V+ + +PPP
Sbjct: 764 SAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPP 801
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 188 WASGHQAGCRAPGSKAPSRHYRSGLR 111
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 162 ASSLMARCPQTRPSGAETILSTLSSARPELAARTP 266
AS+ +R P + + TI ++S++ PEL++ TP
Sbjct: 862 ASNKKSRVPLPKANEKSTISRSVSTSSPELSSNTP 896
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 VPRAVFAD-LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALD 435
+PR + D ++ + E+R + Q P L D + + I QE+V++ D
Sbjct: 249 IPRMLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFD 308
Query: 436 R 438
R
Sbjct: 309 R 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 VPRAVFAD-LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALD 435
+PR + D ++ + E+R + Q P L D + + I QE+V++ D
Sbjct: 249 IPRMLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFD 308
Query: 436 R 438
R
Sbjct: 309 R 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 VPRAVFAD-LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGQEIVHLALD 435
+PR + D ++ + E+R + Q P L D + + I QE+V++ D
Sbjct: 249 IPRMLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFD 308
Query: 436 R 438
R
Sbjct: 309 R 309
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 26.6 bits (56), Expect = 7.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 339 MKQLSVCAS--ADLINNSRFKIGEDSTGYVLPAPVSLKKVL-------KESSPPPMVLSV 187
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 186 GIWPSGWMPCSR 151
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 26.6 bits (56), Expect = 7.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 339 MKQLSVCAS--ADLINNSRFKIGEDSTGYVLPAPVSLKKVL-------KESSPPPMVLSV 187
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 186 GIWPSGWMPCSR 151
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At3g19180.1 68416.m02435 cell division protein-related weak
similarity to cell division protein Ftn2 [Synechococcus
sp. PCC 7942] GI:16226084
Length = 819
Score = 26.6 bits (56), Expect = 7.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 60 KKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTR 197
K+L+S SA ++ ESRS S AW S++A P TR
Sbjct: 427 KQLESNSDSAVRNSILGKESRSTSATPSLEAWL-MESVLANFPDTR 471
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 312 HWHIQTVVSSRTTYYW*GR 368
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 312 HWHIQTVVSSRTTYYW*GR 368
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,418,982
Number of Sequences: 28952
Number of extensions: 224136
Number of successful extensions: 778
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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