Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00553
         (476 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   163   6e-41
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    31   0.57 
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    28   3.0  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF078783-4|AAC26919.2|   87|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  163 bits (396), Expect = 6e-41
 Identities = 77/84 (91%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 182
           CPIVERL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV A+INSGPREDS
Sbjct: 72  CPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDS 131

Query: 183 TRIGRAGTVRRQAVDVSPLRRVNQ 254
           TRIGRAGTVRRQAVDV+PLRRVNQ
Sbjct: 132 TRIGRAGTVRRQAVDVAPLRRVNQ 155



 Score =  111 bits (267), Expect = 2e-25
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +2

Query: 257 IWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 418
           IWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 157 IWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 30.7 bits (66), Expect = 0.57
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 162 SGPREDSTRIGRAGTVRRQA-VDVSPLRRVNQQSGFCAQVHVRLHSEILKQSQSVLQ 329
           S P + S + G + TV   +  + + +R  + QSGF    HV++  EIL+Q+  V++
Sbjct: 149 SAPDDISVKDGESVTVLNISDPEWTYIRNSDNQSGFVPSSHVKIPHEILQQASRVIK 205


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +2

Query: 248 QPTIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR*NI 427
           Q T+    T    A  RN   + E  A+E I A +   N +A+K +   +  A SNR   
Sbjct: 477 QDTVQKARTAVGYAGTRNRSPLREADAEE-IAATEALKNRFAVKSRGTAKAKANSNRGAA 535

Query: 428 LLSHL 442
           LL  +
Sbjct: 536 LLESI 540


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 173 TGSRVDNGSHEYLQRVFSS*QVNNFKRMFD 84
           TGSR  +GS  + Q  FS+  ++ FK  FD
Sbjct: 226 TGSRHSSGSSAHSQFGFSTPSISGFKIFFD 255


>AF078783-4|AAC26919.2|   87|Caenorhabditis elegans Hypothetical
           protein H10E21.1 protein.
          Length = 87

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 297 EILKQSQSVLQMN*LMQLRV--HLTPTPSKRRTSWS 398
           EI +Q  SV   N  +QL+V  HL    SKRRT+W+
Sbjct: 16  EISRQLNSVETTN-ALQLKVIMHLLNRVSKRRTTWT 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,951,179
Number of Sequences: 27780
Number of extensions: 219507
Number of successful extensions: 686
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)