Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00551
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   1.9  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   1.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.7  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -2

Query: 116 SSLYCAMYGSSEYG-YSRS 63
           +SLY A YG SE G Y+R+
Sbjct: 277 TSLYAATYGGSEAGPYTRA 295


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -2

Query: 116 SSLYCAMYGSSEYG-YSRS 63
           +SLY A YG SE G Y+R+
Sbjct: 277 TSLYAATYGGSEAGPYTRA 295


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 223 NRQYQEVSNGPTRIARSPTGSRCATRTTATP 315
           N+     +  PT++  S      A R+ ATP
Sbjct: 191 NKSASRTTTSPTKVKASKASPAAAPRSVATP 221


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 561  TWLSSTSNFLWICCSSTCRPGTTTR 635
            TW SST+   W   ++T R  TTTR
Sbjct: 1041 TWWSSTTTSPW-WTTTTTRRTTTTR 1064


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 125 GSLSSLYCAMYGSSEYGYSRSTLVK*LGRSADFQSS 18
           G LS  Y   +G  EY YS    VK   +  DF  S
Sbjct: 272 GPLSMYYQYPFGLPEYEYSFYQEVKKPKKITDFSIS 307


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
 Frame = +1

Query: 7   MDPHDDWKSAERP-----NYLTNVDLEYP-YSELPYIA 102
           ++ H  W S+ +P     N  TN    YP YS + Y++
Sbjct: 229 LEQHRSWCSSSQPVLSTTNSTTNCYNNYPYYSNMDYLS 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,721
Number of Sequences: 336
Number of extensions: 3170
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)