Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00551
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical pr... 31 0.63
U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical pr... 31 0.84
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 29 2.6
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 29 2.6
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 29 2.6
Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical ... 28 5.9
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 7.8
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 28 7.8
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical
protein C29F7.2 protein.
Length = 394
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 31 SAERPNYLTNVDLEYPYSELPYIAQYKLLKLPFTGELIEHVDYWGEGSIVNGGLYSGFRN 210
S E LT L+Y + +L + K +K+P+T E IE +Y + S +NG + F N
Sbjct: 297 SVENRKNLTKPLLDYYFDKLSSGLEAKGVKMPWTREEIEE-EY--KYSFINGAALTIFAN 353
Query: 211 CYNVNRQYQEVSNGPTRIARSPTGSRC 291
+ N + P + + RC
Sbjct: 354 GFWANSPVLQTDGKPDPVRIGESFKRC 380
>U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical
protein C53B7.3 protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 181 NGGLYSGFRNCYNVNRQYQEVSNGPTRIARSPTGSRCATRTTATPG 318
NGGLYS N YN N QY S ++ + +G+ C T + G
Sbjct: 56 NGGLYS---NTYNNNNQYDMNSQYGNQMGTTGSGTYCTTSYSCRSG 98
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 591 WICCSSTCRPGTTTRQ-*LSRSPC 659
W CS++C PGT RQ +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 507 CRTTSCPITYRNRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 635
C T +CPIT ++ + W + + LW C++TC G R
Sbjct: 686 CPTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 591 WICCSSTCRPGTTTRQ-*LSRSPC 659
W CS++C PGT RQ +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 507 CRTTSCPITYRNRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 635
C T +CPIT ++ + W + + LW C++TC G R
Sbjct: 686 CPTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 591 WICCSSTCRPGTTTRQ-*LSRSPC 659
W CS++C PGT RQ +R PC
Sbjct: 822 WSTCSTSCGPGTLVRQRTCNREPC 845
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 507 CRTTSCPITYRNRQ*WTRTWLSSTSNFLWICCSSTCRPGTTTR 635
C T +CPIT ++ + W + + LW C++TC G R
Sbjct: 686 CPTDTCPITDQSSSVYRGQWGTWS---LWTSCTATCGGGYRKR 725
>Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical
protein R06B9.2 protein.
Length = 258
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 541 TDNDGLARGFPQQATSYGSAVQVRVDRGLRQGSDYHE 651
T DGLA+ PQ++ G+ +Q + G R+ +H+
Sbjct: 202 TVKDGLAKILPQRSQENGNIIQGGILNGFRERGIFHD 238
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 217 NVNRQYQEVSNGPTRIARSPTGSRCATRTTATP 315
+V R Q V GP A SP+ SR ++RTT TP
Sbjct: 374 DVYRTPQSVRKGPMSAAPSPSPSR-SSRTTITP 405
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 217 NVNRQYQEVSNGPTRIARSPTGSRCATRTTATP 315
+V R Q V GP A SP+ SR ++RTT TP
Sbjct: 374 DVYRTPQSVRKGPMSAAPSPSPSR-SSRTTITP 405
>AF067220-6|AAC16980.2| 303|Caenorhabditis elegans Hypothetical
protein C33E10.8 protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 551 MDSHVAFLNKQLLMDLLFKYVS--TGDYDKAVTITKSLQDDNVGFMIEELI 697
MD+H +K+L D LFK ++ K++TIT+S D+ + ELI
Sbjct: 89 MDNHEVVFDKRLTADQLFKKLAPFLRKLPKSITITES--SDDCFYFFRELI 137
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 287 GARRERLRHPGLHQG*LGQNSDAHERAHHSEQRQRHY 397
GA E H G H G + H HHS+ ++ +
Sbjct: 690 GAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQH 726
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 315 RAYIKDDSVKIVTLMSAPIIPNSARDITRIVNERVGMVVIYGM 443
RAYI D + + I+ ARD+ R+V++ G+ + Y M
Sbjct: 134 RAYIPDGEQRDYLMNKYNIVTWHARDVLRLVDDMSGISMHYAM 176
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 91 PYIAQYKLLKLPFTGELIEHVDYW---GEGSIVNGGLYSGFRNCY 216
P I +K+LK P LIE + YW G IV+ L + + +C+
Sbjct: 17 PVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCF 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,569,278
Number of Sequences: 27780
Number of extensions: 322599
Number of successful extensions: 1066
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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