Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00551
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.8  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   9.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.0  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   9.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.0  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 185 PLTILPSPQ*STCSISSPVKGSLSS 111
           P+  +P PQ +  +I SPV+  LSS
Sbjct: 792 PVYCVPVPQVNDSTILSPVREKLSS 816


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 285 PVRDENDCDTRAYIKDDSVKIVTLMSAPIIPNSA-RDITRIVN 410
           P+R  +DC T + +  D   +V L       +S  R +  IV+
Sbjct: 419 PIRKISDCSTTSSLSGDESDVVELQPVKSSKSSGWRKLRNIVH 461


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 177 RQRGTVFGLP*LLQRKPTVPRGQQRADKDRK 269
           R + TV  LP  L R P+V        KD+K
Sbjct: 555 RLKSTVSLLPLPLARTPSVMSASSTCKKDKK 585



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 180 DDTPLTPVVDMLDQLSSE 127
           D+TPL PVV + +  S+E
Sbjct: 439 DETPLDPVVVISNDKSTE 456


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 532 LTGTDNDGLARGFPQQATSY 591
           LT  D DG  +GFP + + Y
Sbjct: 17  LTTQDVDGFLQGFPGKNSPY 36


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/23 (30%), Positives = 8/23 (34%)
 Frame = -1

Query: 324 CKPGCRSRSRRAPGSCWGSCDPC 256
           C P      R  P +    C PC
Sbjct: 56  CTPDAAELKRNLPDALENECSPC 78


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = +3

Query: 564 WLSSTSNFLWICCSSTCRPGTTTRQ 638
           W   T +     CS  C PG   +Q
Sbjct: 437 WARGTKDIPISACSLPCEPGMIKKQ 461


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/23 (30%), Positives = 8/23 (34%)
 Frame = -1

Query: 324 CKPGCRSRSRRAPGSCWGSCDPC 256
           C P      R  P +    C PC
Sbjct: 56  CTPDAAELKRNLPDALENECSPC 78


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = +3

Query: 564 WLSSTSNFLWICCSSTCRPGTTTRQ 638
           W   T +     CS  C PG   +Q
Sbjct: 527 WARGTKDIPISACSLPCEPGMIKKQ 551


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,011
Number of Sequences: 438
Number of extensions: 3982
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)