Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00545
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 2e-62
SB_56| Best HMM Match : Actin (HMM E-Value=0) 235 2e-62
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 235 2e-62
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 3e-62
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 122 4e-28
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 88 6e-18
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 87 2e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 8e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.003
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 33 0.22
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 2.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 2.8
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 29 2.8
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 2.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.8
SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.6
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_46063| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00015) 29 4.8
SB_24603| Best HMM Match : GatB_Yqey (HMM E-Value=0.7) 29 4.8
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 4.8
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 4.8
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 28 6.4
SB_36584| Best HMM Match : ResIII (HMM E-Value=0.95) 28 8.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 28 8.4
SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20) 28 8.4
SB_2065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 235 bits (576), Expect = 2e-62
Identities = 117/149 (78%), Positives = 120/149 (80%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPHAI 613
REKMTQIMFETFN+PAMYVAIQAVL P + PHAI
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 175
Query: 614 LRLDLAGRDLTDYLMKILTERGYSFTTTA 700
LRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 176 LRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Score = 114 bits (275), Expect = 6e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 235 bits (576), Expect = 2e-62
Identities = 117/149 (78%), Positives = 120/149 (80%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPHAI 613
REKMTQIMFETFN+PAMYVAIQAVL P + PHAI
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 175
Query: 614 LRLDLAGRDLTDYLMKILTERGYSFTTTA 700
LRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 176 LRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Score = 116 bits (278), Expect = 2e-26
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 235 bits (576), Expect = 2e-62
Identities = 117/149 (78%), Positives = 120/149 (80%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPHAI 613
REKMTQIMFETFN+PAMYVAIQAVL P + PHAI
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 176
Query: 614 LRLDLAGRDLTDYLMKILTERGYSFTTTA 700
LRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 177 LRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Score = 122 bits (293), Expect = 4e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 235 bits (574), Expect = 3e-62
Identities = 116/149 (77%), Positives = 120/149 (80%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPHAI 613
REKMTQIMFETFN+PAMYVAIQAVL P + PHAI
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 176
Query: 614 LRLDLAGRDLTDYLMKILTERGYSFTTTA 700
+RLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 177 IRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Score = 117 bits (282), Expect = 8e-27
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 1e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVL 141
Score = 117 bits (282), Expect = 8e-27
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYE--GYA 597
LYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 143 LYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 128 bits (310), Expect = 3e-30
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +2
Query: 209 SGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 385
S + G + L+ +EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRC-TRPVVPPVSCWTPATV 562
VLLTE PLNP NREKM ++MFE + +Y+AIQAVL + ++ V + V
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 563 SPTPCPSTKDTHSPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 700
+ CP + PH RLD+AGRD+T YL+K++ RGY+F TA
Sbjct: 164 THI-CPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTA 208
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 122 bits (293), Expect = 4e-28
Identities = 62/121 (51%), Positives = 78/121 (64%)
Frame = +2
Query: 338 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCT 517
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV+
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 518 RPVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 697
+ + P PHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 698 A 700
A
Sbjct: 2249 A 2249
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 116 bits (278), Expect = 2e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 95.9 bits (228), Expect = 3e-20
Identities = 53/90 (58%), Positives = 58/90 (64%)
Frame = +2
Query: 431 NREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPHA 610
N + M +IMFETFN+PAMYVAIQAVL P + PHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 611 ILRLDLAGRDLTDYLMKILTERGYSFTTTA 700
I+RLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTA 167
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 358
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 88.2 bits (209), Expect = 6e-18
Identities = 48/83 (57%), Positives = 54/83 (65%)
Frame = +2
Query: 452 IMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLDLA 631
IMFE FN+PA+YVAIQAVL + P + PHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 632 GRDLTDYLMKILTERGYSFTTTA 700
GRDLTDYLMK++TERGYSFTTTA
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTA 83
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = +2
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVS 565
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 566 PTPCPSTKDTHSPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 700
P + PH+I+R D+AGRD++ YL +L + G+ F +++
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSS 230
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 475
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 476 PAMYVAIQAVL 508
PA ++ +VL
Sbjct: 63 PAFFLCKNSVL 73
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 514 YASGRTTGIVLDSGDGVSHTVPIYEGYAL 600
+A+GR+ G+V+DSG + VP+++GY L
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 227
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYAL 600
LYASG T G+ L SG + IYEG+ L
Sbjct: 772 LYASGMTLGVCLSSGFSCTQAAVIYEGHTL 801
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 403
+EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 532 TGIVLDSGDGVSHTVPI 582
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 209 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 93
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 532 TGIVLDSGDGVSHTVPIYEGYAL 600
TG V+DSGDGV+H +P+ EGY +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVI 84
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 382
GR G + GL N+ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 383 EEHPVLLTEAPLNPKANRE 439
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 456 CSKHSTRPPCTSPSKPCSAVRVRSYHRYRAG 548
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 512 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 604
CT+ +P +TP T TPC PST+ +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 412 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 504
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 179 VPLDRGKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 352
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 353 TFYN 364
T N
Sbjct: 497 TCPN 500
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 353 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVP 532
T E VAPE + E ++P+ T + ET TP VA + + V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 533 PVSCWTPATVSPTPCPSTKDTHSPHAIL 616
+ TV+P + + T +P +
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 365 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVP 532
E +APE E P + E+ P+ MT + ET TP VA + + + P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 533 PVSCWTPATVSPTPCPSTKDTHSP 604
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = +2
Query: 353 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVP 532
T E VAPE + E+ L + +T + ET TP VA + + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 533 PVSCWTPATVSPTPCPSTKDTHSPHAIL 616
+ TV+P + + T +P +
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAPETTM 5000
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNE 367
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 99 EVAALVVDNGSGMCKAGFAGDDAPRAV 179
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 583 YEGYALPPRHPASGLSRSRPHRLPHEDP 666
YE LPP P+SG + S P P EDP
Sbjct: 140 YEHAFLPPLAPSSGPTPSPPPTKPQEDP 167
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 527 VPPVSC---WTPATVSPTPCPSTKDTHSPHAILRLDLAGRDLTDYLMK 661
+P + C + T SP+P PST T+ P A+L +L+ YL++
Sbjct: 124 MPAIMCPHLLSTGTTSPSPSPSTSTTNVP-AVLPAKQLSTELSSYLLQ 170
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1798
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +2
Query: 467 FNTPAMYVAIQAVLRCTRPV---VPPVSCWTPATVSPTPCPSTKDTHSPHAIL 616
+ TPA IQ LR T+P+ P P T P PS DT IL
Sbjct: 570 YTTPAKRTIIQEELRYTKPLTTTTPTTPTQAPTTRPEAPPPSIPDTVREQRIL 622
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 459 SKHSTRPPCTSPSKPCSAVRVRSYHRYRAG 548
S S R P T+PS PC V S Y AG
Sbjct: 492 SGSSAREPSTAPSLPCDLVAATSAKMYLAG 521
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +2
Query: 410 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTK 589
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 590 DTHSP 604
P
Sbjct: 946 QPQPP 950
>SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1644
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 221 GRYGTEGLLCRNEA-QSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 394
G T+ ++ RNEA Q + L L +P H WD++ K ++ + E+ + P P
Sbjct: 112 GIQDTDAVIGRNEALQQTKQYLQL-FPNLHNREQYWDELAKEVYRYIGNKEVPLLPVHRP 170
Query: 395 VLLTEAPLNPKANREKMTQIMFETF 469
V E+ K E+ +++ E F
Sbjct: 171 V-EDESASEKKEKDEQASRVKIEWF 194
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 318 VTIPCSMGYLRVRIPLLLCASFLHKSPSVP 229
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_46063| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00015)
Length = 798
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 440 KMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPST 586
+++ I+ E +NT V + ++RC P V V T + P PST
Sbjct: 601 ELSPIVAELYNTSLKEVMVNDLIRCWLPRVKFVDDLTAIEIIPRNAPST 649
>SB_24603| Best HMM Match : GatB_Yqey (HMM E-Value=0.7)
Length = 984
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAGLR 554
R P T+PS PC V S Y AG R
Sbjct: 532 REPSTAPSLPCDLVAATSARMYLAGQR 558
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 461 ETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKD 592
+ + P + +Q ++ P + P +C TP +SP T+D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = -1
Query: 474 VLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG 295
VL N ++++F +LGL A + T C T +L + ++++SQ+ + C +
Sbjct: 44 VLLAPNAMFMVFLFYSLGLAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVS 102
Query: 294 YLRVRIPLLLCASFL 250
R +LL ASF+
Sbjct: 103 VARCFASMLLTASFI 117
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Frame = +2
Query: 371 RVAPEEHPVLLTEAPLNPKANREKMTQIMFET----FNTPAMYVAIQAVL-----RCTRP 523
++A + +P + E N K + +K+ Q M +T +N P + L + P
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTLLYNMPKIMRKFAFELPNWAPKIPLP 925
Query: 524 VVPPVSCWTPATVSPTPCPSTKDTHSPH 607
PP T A +P+ +D + PH
Sbjct: 926 TEPPTEKMTEAPTTPSAVHGEEDKNKPH 953
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 390 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASFL--HKSPSVPYRPS 217
CS + + C + ++V CS + V + ++C+ H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 216 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 124
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAG 548
R P T+PS PC+ V S Y AG
Sbjct: 821 REPSTAPSMPCNLVAATSARMYLAG 845
>SB_36584| Best HMM Match : ResIII (HMM E-Value=0.95)
Length = 1244
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAG 548
R P T+PS PC+ V S Y AG
Sbjct: 757 REPSTAPSLPCNLVAATSARMYLAG 781
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = +2
Query: 392 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSP- 568
PVL A P A + TQ + P ++ V P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPP 81
Query: 569 --TPCPST 586
T P+T
Sbjct: 82 VVTDAPTT 89
>SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20)
Length = 918
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAG 548
R P T+PS PC V S + Y AG
Sbjct: 603 REPSTAPSLPCDLVAATSANMYLAG 627
>SB_2065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAG 548
R P T+PS PC+ V S Y AG
Sbjct: 280 REPSTAPSLPCNLVAATSARMYLAG 304
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,162,903
Number of Sequences: 59808
Number of extensions: 632997
Number of successful extensions: 2502
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2477
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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