Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00543
(657 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 161 1e-38
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 140 3e-32
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 129 7e-29
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 116 7e-25
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 113 4e-24
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 106 4e-22
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 101 1e-20
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 91 2e-17
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 91 2e-17
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 87 3e-16
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 83 8e-15
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 80 5e-14
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 71 3e-11
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 70 6e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 66 7e-10
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 65 1e-09
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 64 2e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 62 9e-09
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 57 4e-07
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 55 2e-06
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 51 3e-05
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 3e-04
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 46 6e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 45 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 42 0.010
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 42 0.013
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 42 0.017
UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2; ... 38 0.16
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 38 0.28
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 37 0.37
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.37
UniRef50_P54589 Cluster: Uncharacterized protein yhcE; n=1; Baci... 36 1.1
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; ... 35 1.5
UniRef50_A1HIY8 Cluster: Na+/solute symporter; n=10; Proteobacte... 34 2.6
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 6.0
UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome s... 33 8.0
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 8.0
UniRef50_Q10QC8 Cluster: Salt-inducible protein, putative, expre... 33 8.0
UniRef50_A1RQY3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 161 bits (392), Expect = 1e-38
Identities = 74/82 (90%), Positives = 79/82 (96%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 197 ARVRKNTEARRKGRHCGFGREE 262
RVRKNTEARRKGRHCGFG+ +
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRK 82
Score = 122 bits (294), Expect = 8e-27
Identities = 59/87 (67%), Positives = 64/87 (73%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
R+GTANARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLME
Sbjct: 81 RKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLME 140
Query: 436 YIHRKKAEKARTKMLSDQAEARRNK*R 516
YIH+KKAEK R+KML+DQAEARR K R
Sbjct: 141 YIHKKKAEKQRSKMLADQAEARRQKVR 167
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3
Query: 504 Q*VKEARKRCEERIAAKKEELLQTFAREDEAALTA 608
Q V+EARKR EERIA KK+EL+ A+EDE A A
Sbjct: 164 QKVREARKRREERIATKKQELIALHAKEDEIAAKA 198
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 140 bits (339), Expect = 3e-32
Identities = 64/82 (78%), Positives = 72/82 (87%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 197 ARVRKNTEARRKGRHCGFGREE 262
AR RKNT ARRKGRH G G+ +
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 117 bits (281), Expect = 3e-25
Identities = 54/94 (57%), Positives = 68/94 (72%)
Frame = +1
Query: 229 KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 408
KG + + R+GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 409 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 510
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
Score = 40.7 bits (91), Expect = 0.030
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +3
Query: 513 KEARKRCEERIAAKKEELLQTFAREDE 593
KEARKR EER+ AKKEE+++T ++E+E
Sbjct: 167 KEARKRREERLQAKKEEIIKTLSKEEE 193
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 129 bits (311), Expect = 7e-29
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +2
Query: 41 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 220
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 221 ARRKGRHCGFGREE 262
ARRKGRH G G+ +
Sbjct: 61 ARRKGRHMGIGKRK 74
Score = 110 bits (265), Expect = 2e-23
Identities = 51/90 (56%), Positives = 64/90 (71%)
Frame = +1
Query: 229 KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 408
KG + + R+GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 409 FKNKRVLMEYIHRKKAEKARTKMLSDQAEA 498
FKNKR+LME+IH+ KA+KAR K+L+DQAEA
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQAEA 153
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 116 bits (278), Expect = 7e-25
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 197 ARVRKNTEARRKGRHCGFGREE 262
+R RKN ARRKGRH G G+ +
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRK 82
Score = 104 bits (249), Expect = 2e-21
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
R+GTA+ARMPQK LW A KID+HLYH LY + KGN FKNKRVL++
Sbjct: 81 RKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLID 140
Query: 436 YIHRKKAEKARTKMLSDQAEARRNK*RRHASAARNVLPPRRR 561
+IH+KKAE+ R K LSDQAEA R + R ++ L R++
Sbjct: 141 HIHKKKAERLRAKQLSDQAEAMRQRKRESRVNRQHRLEERKK 182
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 113 bits (272), Expect = 4e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 197 ARVRKNTEARRKGRHCGFGREE 262
AR RK EA+ GRH G GR E
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRRE 102
Score = 86.2 bits (204), Expect = 6e-16
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
R G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E
Sbjct: 101 REGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVE 160
Query: 436 YIHRKKAEKARTKMLSDQAEARRNK*RRHASAAR 537
+IH+ K EK + + L++Q A+ + ++ + AR
Sbjct: 161 HIHKIKNEKKKERQLAEQLAAKHLRDEQNRNKAR 194
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 106 bits (255), Expect = 4e-22
Identities = 51/85 (60%), Positives = 58/85 (68%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
RRGT AR+P K LW AKKID+H+YHS+Y+K KGNVFKNKRVLME
Sbjct: 101 RRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLME 160
Query: 436 YIHRKKAEKARTKMLSDQAEARRNK 510
IH+ KAEKAR K L+DQ EARR K
Sbjct: 161 AIHKSKAEKAREKSLADQFEARRAK 185
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 181
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 182 ---------------AVHSRARVRKNTEARRKGRHCGFGR 256
+HSRAR + A+R GRH G+G+
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGK 100
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 101 bits (243), Expect = 1e-20
Identities = 52/80 (65%), Positives = 60/80 (75%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 197 ARVRKNTEARRKGRHCGFGR 256
A KNT KGRH G+
Sbjct: 61 AHCEKNT---LKGRHMVIGK 77
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/123 (34%), Positives = 67/123 (54%)
Frame = +1
Query: 217 RST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 396
++T KG + + +GTAN +P++ W +KKID H+ HSLY++
Sbjct: 65 KNTLKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRV 124
Query: 397 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK*RRHASAARNVLPPRRRNCCRP 576
K NVFKN+ +LME IH+ KA+KA K+L+DQ + + +K + +P R+ P
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQGDVQSSKSKDAQKLREEQVPTRQHKFQFP 184
Query: 577 SLE 585
L+
Sbjct: 185 FLK 187
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 91.5 bits (217), Expect = 2e-17
Identities = 47/106 (44%), Positives = 63/106 (59%)
Frame = +1
Query: 193 PRSCPQKHRST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 372
P S +KH +G + GTANARM +K W +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 373 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 510
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ EARR+K
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQTEARRSK 620
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 91.1 bits (216), Expect = 2e-17
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 197 ARVRKNTEARRKGRHCGFGREE 262
R+R E + GRH G G+ +
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRK 82
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
R+G+ N+R K +W + K++RHLY SLY+K+KGNVFKNK++L E
Sbjct: 81 RKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTE 140
Query: 436 YIHRKKAEKARTKMLSDQAEARRNK 510
+IH+ K E+ R + D+ + R K
Sbjct: 141 FIHKAKNEQKRKEEFLDKFKLMREK 165
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 87.4 bits (207), Expect = 3e-16
Identities = 34/79 (43%), Positives = 60/79 (75%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 197 ARVRKNTEARRKGRHCGFG 253
R R E ++KGRH G G
Sbjct: 61 YRARIRHEQKKKGRHRGPG 79
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/86 (33%), Positives = 37/86 (43%)
Frame = +1
Query: 211 KHRST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 390
+H KG R+G ARM +KELW KKIDR Y LY+
Sbjct: 66 RHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYI 125
Query: 391 KAKGNVFKNKRVLMEYIHRKKAEKAR 468
+AKG FK+K L ++ K R
Sbjct: 126 RAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 82.6 bits (195), Expect = 8e-15
Identities = 36/80 (45%), Positives = 55/80 (68%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 197 ARVRKNTEARRKGRHCGFGR 256
R RK EA++KGRH G G+
Sbjct: 61 GRCRKRLEAKKKGRHMGTGK 80
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/99 (31%), Positives = 54/99 (54%)
Frame = +1
Query: 202 CPQKHRST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 381
C ++ + KG + R GTANARMPQK++W +I + +
Sbjct: 63 CRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRV 122
Query: 382 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEA 498
Y +AKG++FK++ + + I ++KA++ R K L++QA+A
Sbjct: 123 FYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQAKA 161
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
RRGT ARMP K LW +KIDRHLY +LY KAKGN+FKNKRVL+E
Sbjct: 81 RRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLE 140
Query: 436 YIHRKKAEKARTKMLSDQAEARRNK 510
+I + E+ K ++ E RR K
Sbjct: 141 HIVGMQKEQELEKKKKEELEQRRKK 165
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 197 ARVRKNTEARRKGRHCGFGR 256
R+R A+R GRH G G+
Sbjct: 61 GRIRARHAAKRLGRHSGHGK 80
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +2
Query: 41 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 211
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/76 (39%), Positives = 52/76 (68%)
Frame = +2
Query: 26 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 205
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 206 RKNTEARRKGRHCGFG 253
+K E R+KGR G G
Sbjct: 66 KKLKEQRKKGRRRGPG 81
Score = 46.0 bits (104), Expect = 8e-04
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
RRG A AR P KE W + KIDR +Y LY AKG F+++ L
Sbjct: 83 RRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFL 142
Query: 436 YIHRKKAEK 462
Y+ + K
Sbjct: 143 YMREHELLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +2
Query: 35 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 214
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 215 TEARRKGRHCGFG 253
E ++KGR G G
Sbjct: 66 HEKKKKGRRRGPG 78
Score = 39.9 bits (89), Expect = 0.053
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLME 435
R+G AR K W K ID Y LY K KGN+FK++ L+
Sbjct: 80 RKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLL 139
Query: 436 YIHRK 450
Y+ +K
Sbjct: 140 YLKQK 144
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 66.1 bits (154), Expect = 7e-10
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 197 ARVRKNTEARRKGRHCGFG 253
R R E R G G G
Sbjct: 61 GRARSRAEKRAYGHRKGPG 79
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +1
Query: 358 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 510
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQAEARR K
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQAEARRCK 160
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 29 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 208
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 209 KNTEARRKGRHCGFGREE 262
T ARR+G H G + +
Sbjct: 90 --TLARRRGWHMGIRKRK 105
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +1
Query: 346 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 510
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ QAEARR+K
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSK 112
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 513 KEARKRCEERIAAKKEELLQT 575
+EA K CEER+ AKKEE+++T
Sbjct: 114 EEAHKGCEERLQAKKEEIIET 134
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 197 ARVRKNTEARRKGRHCGFG-REEVQPMRVCHRRNY 298
R R+ G G G R+ R +R Y
Sbjct: 61 GRARERDAKESYGHKKGAGSRKGKAGARQNEKREY 95
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/72 (36%), Positives = 44/72 (61%)
Frame = +2
Query: 38 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 217
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 218 EARRKGRHCGFG 253
E KGR G G
Sbjct: 67 EQLAKGRRRGEG 78
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Frame = +2
Query: 35 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 196
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 197 ARVRKNTEARRKGRHCGFG 253
+R RK + KGR G G
Sbjct: 66 SRARKAAAQKAKGRRSGQG 84
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 50.8 bits (116), Expect = 3e-05
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = -1
Query: 510 LIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQE 331
L+AA L L+ L LL L DVL E+ L+LEH+TL L +E ++ +P++L +V +
Sbjct: 66 LLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTVPAQ 125
Query: 330 QFS*NPLSLYP*FLLWHTRIGCTSSL 253
Q + + L+L P L HT + T++L
Sbjct: 126 QATEDTLALNPESLRRHTSLPGTAAL 151
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +2
Query: 23 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 202
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 203 VR-KNTEARRKGRHCG 247
+ K + ++G G
Sbjct: 64 AQHKRRQKAKRGSKAG 79
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 29 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 202
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 203 VRKNTEARRKGRHCGFGREE 262
+ RRKGR G GR +
Sbjct: 64 SKVRHLQRRKGRRRGMGRRK 83
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = +1
Query: 211 KHRST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 390
+H KG + R+G A AR+ KE W + IDR Y LYM
Sbjct: 67 RHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
Query: 391 KAKGNVFKNKRVLMEYI 441
AKG F++ L Y+
Sbjct: 127 LAKGGTFRDLASLKRYM 143
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +1
Query: 352 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 462
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 44 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 175
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 17 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 193
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 194 RARVRKNTEAR 226
R+++ + R
Sbjct: 60 GGRLKERRKKR 70
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 256 RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 414
R+G AR K++W K IDRH Y LY+K KG +K
Sbjct: 82 RKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -3
Query: 178 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 62
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 38 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 217
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 218 EARRKGRHCGFG 253
++KGR G G
Sbjct: 65 IKKKKGRRRGHG 76
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = +2
Query: 23 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 202
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 203 VRKNTEARRKGRHCGFGREE 262
+ ++ G G GR +
Sbjct: 62 KKLRKAKKQSGLKRGIGRRK 81
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 41.5 bits (93), Expect = 0.017
Identities = 33/94 (35%), Positives = 43/94 (45%)
Frame = -1
Query: 465 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 286
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + + L
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRHRILILLIQVTFS 124
Query: 285 WHTRIGCTSSLPKPQ*RPFLRASVFLRTRARECT 184
+ P PF R+ VF R RARE T
Sbjct: 125 GIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 659
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 328 IFLKPFVFVPIVPSVAYAHWLYLFSTKATVTT-LSTCFCVFADTSAGVYCYRFLDDETIL 152
IF++PF IV + W F A + ++T FC+FAD S + R DD+ +
Sbjct: 402 IFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFADASPAKWT-RLQDDDVAI 460
Query: 151 DHLTDVLSGVGVCDLIDFI 95
+ + SG + D+I F+
Sbjct: 461 EEEKEEYSG-SIEDIIKFL 478
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 23 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 202
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 203 VRKNTEARRK 232
+ R K
Sbjct: 64 AQTKKAQRNK 73
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3
Query: 214 VFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLI 104
VF+ S G+ ++ LDD+ I D ++D+L GVG+ D I
Sbjct: 127 VFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFI 163
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 388 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 510
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>UniRef50_P54589 Cluster: Uncharacterized protein yhcE; n=1;
Bacillus subtilis|Rep: Uncharacterized protein yhcE -
Bacillus subtilis
Length = 253
Score = 35.5 bits (78), Expect = 1.1
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = -3
Query: 328 IFLKP-FVFVPIVPSVAYAHWLY-------LFSTKATVTTLSTCFCVFADTSAGVYCYRF 173
+FL P FVF + WLY LFS+K + L A T+ G++ Y
Sbjct: 58 LFLSPVFVFYHLRKEGKSQLWLYNPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHM 117
Query: 172 LDDETILDHLTDVLSGVGVCDLIDFI 95
L + +L+H D+ S V + ++ I
Sbjct: 118 LSVKNLLEHQVDITSTVALLNMYGLI 143
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.5
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +2
Query: 35 QKRLAASVMRCGKKKVWLDPNEINEIAN 118
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; n=6;
Oryza sativa|Rep: Spc97/Spc98 family protein, expressed -
Oryza sativa subsp. japonica (Rice)
Length = 1139
Score = 35.1 bits (77), Expect = 1.5
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +2
Query: 32 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 202
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 203 VRKNTEARRKGRHCGFGREEVQPMRVCHR 289
+ T RKGR GFG E + + ++
Sbjct: 806 DEETTSISRKGRAQGFGIEALDVLNFTYK 834
>UniRef50_A1HIY8 Cluster: Na+/solute symporter; n=10;
Proteobacteria|Rep: Na+/solute symporter - Ralstonia
pickettii 12J
Length = 476
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 525 CVPPSLIAAGLSLVAKHLRPGLLSL--LPVDVLHEHTLVLEHITLRL 391
CVP S+ + + AK+L PG+ SL LPV + H H L+ +T L
Sbjct: 271 CVPISIALGFIGVAAKYLYPGIKSLYALPVFLQHMHPLLAGVVTTSL 317
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 186 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 67
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 340
Score = 32.7 bits (71), Expect = 8.0
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -3
Query: 250 KATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 95
KA VT+L C F+D V+C F TI+DH + G +C L+ FI
Sbjct: 62 KANVTSLFICNLSFSDILVCVFCLPFTVIYTIMDHW---VFGSLLCRLVPFI 110
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 507 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 388
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_Q10QC8 Cluster: Salt-inducible protein, putative,
expressed; n=3; Oryza sativa|Rep: Salt-inducible
protein, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 796
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = -1
Query: 555 SWRQYVPRSACVPPSLIAAGLSLVAKHLRPGLLSLLPVDVL-HEHTLVLEHI 403
++R+++ +C+P SL+ L +HL P LLS +P+D L H H +L H+
Sbjct: 82 AYRRHLSPPSCLP-SLVPLLPVLPYRHLLPLLLSFVPLDPLRHLHRHLLAHL 132
>UniRef50_A1RQY3 Cluster: Putative uncharacterized protein; n=1;
Pyrobaculum islandicum DSM 4184|Rep: Putative
uncharacterized protein - Pyrobaculum islandicum (strain
DSM 4184 / JCM 9189)
Length = 176
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 377 WYRCLSIFLAVLYFRSNFLKTLCLCTHSSFCGIRALAVPLLYQSHSDDP 231
W + + AVL F F+KTL T +++ L LL++S++ +P
Sbjct: 83 WSIMILAYFAVLLFAMAFIKTLAFATTAAYAASVTLLTYLLFRSNATEP 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,621,748
Number of Sequences: 1657284
Number of extensions: 12370811
Number of successful extensions: 37512
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 36029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37465
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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