Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00541
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.46
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 5.7
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 22 5.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 7.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 7.5
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 0.46
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 148 SLNTTRINSRPYVSKAPSCIHSSPTTTNL 234
SL+ T N + Y S+ +HS P+T N+
Sbjct: 364 SLDNTNTNDQDYSSQNYLTVHSFPSTLNI 392
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.2
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 215 HRPQRTWWRKVFRSRSKCSFRYDHLRKEAS-EYEPYEPDRAAEPWRAALDEELTAYVA 385
H P+ R F R+ S YD ++E S E +E W+ DEE T A
Sbjct: 155 HHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHKETHIDWQPE-DEECTEATA 211
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 676 RLVSDAENTYQTAISDNYKTMSDTTFKAL 762
+++S N Y+ + +NY +T +K L
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKL 108
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 130 KVLVEPSLNTTRINSRPYVSKAPSCIHSSPTTTN 231
K+L+ PS+ T R + ++P C +P TN
Sbjct: 188 KLLIGPSIRITPAKKRIKLEQSPLC-PPAPRLTN 220
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 249 FDLAPSVLSGMTIYAKKRPSMNPTSPIERLSLGGRHL 359
+ L +LSG I KKR M P + + G ++
Sbjct: 127 YHLYMGLLSGGIILRKKREFMQKIWPFKEYQMNGNNI 163
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1
Query: 697 NTYQTAISDNYKTMSDTTFKALDDNYL 777
N Y ++NY + +K L NY+
Sbjct: 95 NNYNNNYNNNYNNNYNNNYKKLYKNYI 121
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1
Query: 697 NTYQTAISDNYKTMSDTTFKALDDNYL 777
N Y ++NY + +K L NY+
Sbjct: 95 NNYNNNYNNNYNNNYNNNYKKLYKNYI 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,505
Number of Sequences: 438
Number of extensions: 5243
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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