Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00540
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.3  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 EKNPYTTFGINKFADYTP 317
           ++NPY + G+   A Y+P
Sbjct: 18  DQNPYPSIGVESSAFYSP 35


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 20/78 (25%), Positives = 31/78 (39%)
 Frame = -1

Query: 342 IPTCSAVPQEYNQQIC*CQT*YMDSSRSIVYLCQVFLE*LIMQLSVGIILVFPVMFFDEN 163
           I TCS V  E  + +  C   Y D         +  L  L  Q++  I  +    FFD +
Sbjct: 275 IMTCSGVHSESQKLVGVCYE-YQDRFSDESKKRRELLR-LAQQVNANIAQITAANFFDIS 332

Query: 162 FEQFFGLIEVIMSRSICL 109
              F G++  I +  I +
Sbjct: 333 RSTFLGILATITTYFIVI 350


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 409 NKCIVTACKMFKIYRI*LINYLNHLFLEF 495
           +K  +TAC++FKI    +++ L  + + F
Sbjct: 197 DKLEITACRLFKIDNSLILDLLVFITINF 225


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 406 RNKCIVTACKMFKI 447
           +NK  +TAC++F I
Sbjct: 252 QNKLEITACRLFSI 265


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 377 SQNLCLLSRQPQSQPALLFLRSIISKF 297
           SQ+L    + PQ+QPA  +   I+  F
Sbjct: 73  SQDLQHSYQSPQTQPARFYSTPIVPHF 99


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 409 NKCIVTACKMFKI 447
           NK  +TAC++F I
Sbjct: 337 NKIEITACRLFNI 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,390
Number of Sequences: 336
Number of extensions: 2250
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)