BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00539 (603 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 25 0.76 DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.0 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 7.0 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.0 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.0 DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 9.3 >AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate dehydrogenase protein. Length = 363 Score = 24.6 bits (51), Expect = 0.76 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 401 KTGKKIAFLEVEVRNKDKNQVLASGRHTKYI 493 KTGKKI+ LE E+ N K Q + Y+ Sbjct: 280 KTGKKISELEKEMLNGQKLQGPFTAEEVNYM 310 >DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine receptor alpha9subunit protein. Length = 431 Score = 22.6 bits (46), Expect = 3.0 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = -1 Query: 252 IHHVVCLFDLSVQVPLGTQSP 190 I H++C+ DL Q+P + +P Sbjct: 292 ICHILCMSDLHWQLPHNSTNP 312 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 21.4 bits (43), Expect = 7.0 Identities = 8/27 (29%), Positives = 13/27 (48%) Frame = +3 Query: 408 EKKLHSSKLKFGTKTKIKSWLQADTPN 488 E+KL +K FG + W++ N Sbjct: 23 EEKLEWTKYPFGAEANTPGWVEESFTN 49 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.4 bits (43), Expect = 7.0 Identities = 8/24 (33%), Positives = 17/24 (70%) Frame = -3 Query: 439 NFNFEECNFFSGFTSFGLYFNIVS 368 N+N++ N+ + + S LY+NI++ Sbjct: 308 NYNYK--NYNNNYNSKKLYYNIIN 329 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 7.0 Identities = 8/24 (33%), Positives = 17/24 (70%) Frame = -3 Query: 439 NFNFEECNFFSGFTSFGLYFNIVS 368 N+N++ N+ + + S LY+NI++ Sbjct: 319 NYNYK--NYNNNYNSKKLYYNIIN 340 >DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein protein. Length = 250 Score = 21.0 bits (42), Expect = 9.3 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 264 KCARIHHVVCLFDLSVQVPLGTQS 193 K R H CL L V VPLG ++ Sbjct: 58 KNRRAHLRNCLEKLKVLVPLGPET 81 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 144,702 Number of Sequences: 438 Number of extensions: 2677 Number of successful extensions: 10 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17726685 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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