Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00538
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    98   7e-23
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    95   7e-22
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 97.9 bits (233), Expect = 7e-23
 Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -3

Query: 515 QGPEAGMPFKLFVMLSNYDLARIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDR- 339
           +G EAG P  LFVM+SNY   R++QD     TC +  +FCG+KDK YPDRR+MG+PFDR 
Sbjct: 589 KGTEAGYPCHLFVMISNYADDRVEQDTSG--TCSDGDTFCGIKDKLYPDRRSMGYPFDRM 646

Query: 338 PSSSATSLQDFILPNMGLQDITIQLQN 258
           P     +LQ F+ PNM +Q++ IQ  N
Sbjct: 647 PRDGVDTLQQFLTPNMRVQEVVIQFSN 673



 Score = 97.5 bits (232), Expect = 1e-22
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -1

Query: 724 RKMCIEMDRFVTVLNAGENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRND-LTTFNYC 548
           + M IE+DRF   L  G N I R STESS+TIPFE+TFR+L A  N P   D L+ FN+C
Sbjct: 520 KDMFIELDRFAVSLKQGTNTITRHSTESSLTIPFERTFRNLDA--NRPTGGDALSEFNFC 577

Query: 547 GCGWPQHMLVPKGLKPACP 491
           GCGWPQHML+PKG +   P
Sbjct: 578 GCGWPQHMLLPKGTEAGYP 596


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 94.7 bits (225), Expect = 7e-22
 Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = -3

Query: 515 QGPEAGMPFKLFVMLSNYDLARIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDR- 339
           +G   GM  +LFVM+SNYD  +IDQ    +  C +A S+CG+KDK YPDRR+MG+PFDR 
Sbjct: 590 KGTPEGMKSQLFVMISNYDDDKIDQST--EGVCNDAGSYCGIKDKLYPDRRSMGYPFDRM 647

Query: 338 PSSSATSLQDFILPNMGLQDITIQLQN 258
           P +   +LQ F+ PNM +QD+TI+  +
Sbjct: 648 PRNGVDTLQQFLTPNMRVQDVTIKFSD 674



 Score = 89.8 bits (213), Expect = 2e-20
 Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -1

Query: 718 MCIEMDRFVTVLNAGENNIVRQSTESSITIPFEQTFRDLSAQGNDPR-RNDLTTFNYCGC 542
           M IE+D+F   L  G+N I R S++SS+TIPFE+TFR+L    N P+   +L  FN+CGC
Sbjct: 523 MFIELDKFTVNLKQGQNTITRASSQSSVTIPFERTFRNLDL--NRPQGGEELAQFNFCGC 580

Query: 541 GWPQHMLVPKG 509
           GWPQHML+PKG
Sbjct: 581 GWPQHMLIPKG 591


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
 Frame = -1

Query: 691 TVLNAGENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRNDLTTFNYCGCGWPQHMLVPK 512
           T  + G+N   R  TE +   P  Q+ R       DP R      ++   GW   ++ P 
Sbjct: 235 TYTDDGKNQ-QRTGTELTKMRPKRQSSRRHRKNLKDPCRRRQMYVDFGSVGWNDWIVAPL 293

Query: 511 GLKP-ACPSNCSLCYP 467
           G     C   C    P
Sbjct: 294 GYDAYYCGGECEYPIP 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,439
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)