BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00538 (724 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0637 - 16465433-16466242 29 3.7 03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392... 29 3.7 04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 4.9 10_06_0145 + 11215895-11216860 28 6.5 01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 28 6.5 11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 28 8.6 10_08_1027 - 22404169-22404807,22406148-22406360,22407062-224072... 28 8.6 09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 28 8.6 >05_03_0637 - 16465433-16466242 Length = 269 Score = 29.1 bits (62), Expect = 3.7 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 351 PVRPTFKQRHQPPGLHSTKHGLAGHHYSIAKRPEPNPRNPPM 226 P+RP + PP LH H HH+ + +P P P PP+ Sbjct: 137 PLRPLLPR---PPHLHPAFHHQPFHHHLLQPQPPPPP--PPL 173 >03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985, 3920078-3920158,3920271-3920338,3920645-3920698, 3921023-3922379 Length = 750 Score = 29.1 bits (62), Expect = 3.7 Identities = 22/64 (34%), Positives = 26/64 (40%) Frame = -1 Query: 634 TIPFEQTFRDLSAQGNDPRRNDLTTFNYCGCGWPQHMLVPKGLKPACPSNCSLCYPTMI* 455 T+P + SA G P F+ CG ML P +P CPS SL T Sbjct: 597 TLPPPPPTQQPSAFGTLPPPRPSQQFSACGT-----MLPPSSSQPFCPSVRSLAMQTFAT 651 Query: 454 PGSI 443 PG I Sbjct: 652 PGPI 655 >04_04_0233 + 23801944-23802598,23802914-23803047,23803548-23803730, 23804145-23804318 Length = 381 Score = 28.7 bits (61), Expect = 4.9 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -2 Query: 318 PPGLHSTKHGLAGHHYSIAKRPEPNPRNPP 229 PP H H H +S +P+P P+ PP Sbjct: 38 PPPPHHHHHHRRRHRHSKKPKPQPQPQPPP 67 >10_06_0145 + 11215895-11216860 Length = 321 Score = 28.3 bits (60), Expect = 6.5 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = -2 Query: 654 SRRSLP*LFRLNRHSA---TYPLRAMILDATTSLPSITAAAAGPST 526 +R + P L R RH A + + A IL ATT+ + TAAAA P++ Sbjct: 175 ARLNFPELRRGGRHHAPALSASVDAKILQATTTTTADTAAAAAPAS 220 >01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 Length = 313 Score = 28.3 bits (60), Expect = 6.5 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 327 RHQPPGLHSTKHGLAGHHYSIAKRPEPNPRNPP 229 R PP L + +HG+ +Y RP P PP Sbjct: 13 RPPPPHLEAYRHGVPPPYYHSYPRPPPGAAAPP 45 >11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920, 16794787-16796964,16797065-16797322,16799815-16800172 Length = 1530 Score = 27.9 bits (59), Expect = 8.6 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 280 TSLFNCKTSRT*PTEPSHVSLKC 212 TS+FN +S T PT P+ V KC Sbjct: 1080 TSIFNSASSSTPPTSPTPVLAKC 1102 >10_08_1027 - 22404169-22404807,22406148-22406360,22407062-22407255, 22407422-22407566,22407801-22407875,22408222-22408380, 22408466-22408645,22408756-22409243,22409375-22409738, 22409811-22409943,22410023-22410153,22410247-22410354, 22410451-22410897,22411425-22411514,22411607-22411915, 22412209-22412320,22412488-22412699 Length = 1332 Score = 27.9 bits (59), Expect = 8.6 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Frame = -3 Query: 404 SFCGLKDKKYPDRRAMGFPFDRPSSSATS---LQDFILPNMGLQDITIQLQNVP 252 S LK YP GF P+S+AT + D LPN + +L +VP Sbjct: 554 SVAELKSGAYPKDENYGFQHAMPASTATKISVIHDNGLPNTTHSSVDYELPHVP 607 >09_04_0308 + 16567361-16568854,16568946-16569068,16569372-16569649, 16570316-16571924,16572363-16573781 Length = 1640 Score = 27.9 bits (59), Expect = 8.6 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 280 TSLFNCKTSRT*PTEPSHVSLKC 212 TS+FN +S T PT P+ V KC Sbjct: 647 TSIFNSASSSTPPTSPTPVLAKC 669 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,417,590 Number of Sequences: 37544 Number of extensions: 433242 Number of successful extensions: 1049 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1023 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1049 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1886372480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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