Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00537
         (276 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   1.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   3.7  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    22   4.9  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    22   4.9  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    21   6.4  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           21   6.4  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           21   6.4  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           21   6.4  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           21   6.4  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           21   6.4  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           21   6.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           21   6.4  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    21   6.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    21   6.4  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    21   6.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    21   6.4  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
 Frame = -3

Query: 175 TTGSGP----GDRGAKGDAGRTDSK 113
           TT +GP    GDRG  G+ GR+  K
Sbjct: 298 TTTTGPKGEKGDRGEPGEPGRSGEK 322



 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 160 PGDRGAKGDAG 128
           PGD+G KG++G
Sbjct: 461 PGDKGDKGESG 471


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 169  GSGPGDRGAKGDAGRTD 119
            G G G  G KG AGR++
Sbjct: 1495 GGGGGGGGGKGAAGRSN 1511


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 249 NKSFIFIYL*TFHSYNVDNTILHN 178
           ++ F F Y+  F +++ D  +LHN
Sbjct: 186 SQCFFFAYVTRFGAWSKDAPLLHN 209


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 249 NKSFIFIYL*TFHSYNVDNTILHN 178
           ++ F F Y+  F +++ D  +LHN
Sbjct: 186 SQCFFFAYVTRFGAWSKDAPLLHN 209


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 138 PFAPRSPGPLPVV 176
           P+ P  P P+P+V
Sbjct: 183 PYRPPKPAPVPIV 195


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 120 SVLPASPFAPRSPGP 164
           S LPA  +A RSP P
Sbjct: 284 SALPARSYAQRSPYP 298


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 123 VLPASPFAPRSPGPLP 170
           V+P  P  P   GPLP
Sbjct: 27  VIPNHPNCPEMQGPLP 42


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 199 RQHYTSQLTTGSGPGDRGAKGDAGRTDS 116
           RQH  S + T    G RGA     + D+
Sbjct: 125 RQHIPSTVVTALTNGARGANKKLSKVDT 152


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 157 GDRGAKGDAGRTDSKAS 107
           GD+G  G+ GRT ++ +
Sbjct: 27  GDKGEMGEQGRTGAQGN 43



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 160 PGDRGAKGDAG 128
           PG +G KGD G
Sbjct: 89  PGSKGVKGDPG 99



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 160 PGDRGAKGDAGRT 122
           PG +G KGD G T
Sbjct: 351 PGPQGEKGDIGLT 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,387
Number of Sequences: 2352
Number of extensions: 2758
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16167927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)