Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00535
         (349 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr...    27   2.6  
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr...    27   2.6  
At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related...    27   3.4  
At3g14075.1 68416.m01778 lipase class 3 family protein low simil...    27   4.5  
At2g35710.2 68415.m04379 glycogenin glucosyltransferase (glycoge...    26   7.9  
At2g35710.1 68415.m04380 glycogenin glucosyltransferase (glycoge...    26   7.9  

>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
           protein / BTB/POZ domain-containing protein contains
           armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
           BTB/POZ domain, Pfam:PF00651
          Length = 636

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 24  IPNLMKWDIFVVKLGFTYTESLGCSN 101
           IPN+ KW++F + + F YT S+  +N
Sbjct: 536 IPNI-KWEVFELMMRFIYTGSVDITN 560


>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
           protein / BTB/POZ domain-containing protein contains
           armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
           BTB/POZ domain, Pfam:PF00651
          Length = 710

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 24  IPNLMKWDIFVVKLGFTYTESLGCSN 101
           IPN+ KW++F + + F YT S+  +N
Sbjct: 584 IPNI-KWEVFELMMRFIYTGSVDITN 608


>At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related
           contains similarity to storekeeper protein [Solanum
           tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
           Protein of unknown function, DUF573
          Length = 302

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 176 GFRGYRIKVQITDFNLNCRTH*KRKITAP-KRFCVCETKFNDKNIPF 39
           G  GY+ K+Q+    +N     +R+++   K  CV ET+FN K + F
Sbjct: 246 GLSGYQKKLQLEKL-MNLGNGKRRELSDEWKALCVEETRFNIKKLRF 291


>At3g14075.1 68416.m01778 lipase class 3 family protein low
           similarity to calmodulin-binding heat-shock protein
           CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam
           profile PF01764: Lipase, PF03893: Lipase 3 N-terminal
           region
          Length = 642

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 121 GLTKKEKLLHPRDSVYVKPSLTTKISHFIKFGMVFL 14
           G TK+  L+H   +  +KP+ T  + H  K+ ++ +
Sbjct: 151 GFTKENVLIHEPKAGILKPAFTVLVDHNTKYFLLLI 186


>At2g35710.2 68415.m04379 glycogenin glucosyltransferase
           (glycogenin)-related low similarity to glycogenin-2 from
           Homo sapiens [SP|O15488]
          Length = 389

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 215 YRVQLKDFYIKL*WNITC 268
           Y++    FY+KL WNI C
Sbjct: 153 YQMDASYFYLKLRWNIPC 170


>At2g35710.1 68415.m04380 glycogenin glucosyltransferase
           (glycogenin)-related low similarity to glycogenin-2 from
           Homo sapiens [SP|O15488]
          Length = 497

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 215 YRVQLKDFYIKL*WNITC 268
           Y++    FY+KL WNI C
Sbjct: 261 YQMDASYFYLKLRWNIPC 278


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,704,196
Number of Sequences: 28952
Number of extensions: 118635
Number of successful extensions: 218
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)