Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00532
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06256-1|CAA29601.1| 1049|Homo sapiens protein ( Human mRNA for ... 34 0.41
M13918-1|AAA52467.1| 1034|Homo sapiens fibronectin receptor alph... 34 0.41
BC008786-1|AAH08786.1| 1049|Homo sapiens integrin, alpha 5 (fibr... 34 0.41
M14648-1|AAA36808.1| 1048|Homo sapiens protein ( Human cell adhe... 31 2.9
EF560727-1|ABQ59037.1| 1048|Homo sapiens ITGAV protein protein. 31 2.9
BC126231-1|AAI26232.1| 1048|Homo sapiens integrin, alpha V (vitr... 31 2.9
AF251841-1|AAG03000.1| 1048|Homo sapiens vitronectin receptor al... 31 2.9
AC017101-1|AAY24257.1| 1048|Homo sapiens unknown protein. 31 2.9
AB209894-1|BAD93131.1| 1098|Homo sapiens integrin alpha-V precur... 31 2.9
L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit ... 31 3.8
AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein. 31 3.8
Y00796-1|CAA68747.1| 1170|Homo sapiens protein ( Human mRNA for ... 31 5.0
DQ131904-1|AAZ38713.1| 1170|Homo sapiens integrin, alpha L (anti... 31 5.0
BC050280-1|AAH50280.1| 1137|Homo sapiens integrin, alpha 7 protein. 31 5.0
BC008777-1|AAH08777.1| 1086|Homo sapiens ITGAL protein protein. 31 5.0
AY358882-1|AAQ89241.1| 1141|Homo sapiens ITGA7 protein. 31 5.0
AJ228836-2|CAB41535.1| 1137|Homo sapiens integrin alpha 7 chain ... 31 5.0
AJ228836-1|CAB41534.1| 1141|Homo sapiens integrin alpha 7 chain ... 31 5.0
AF072132-1|AAC80458.1| 1137|Homo sapiens integrin alpha-7 protein. 31 5.0
AF052050-1|AAC18968.1| 1137|Homo sapiens integrin alpha 7 protein. 31 5.0
AF032108-1|AAC39708.1| 1137|Homo sapiens integrin alpha-7 protein. 31 5.0
AC002310-2|AAC31672.1| 1223|Homo sapiens leukocyte function-asso... 31 5.0
AB210036-1|BAE06118.1| 1200|Homo sapiens ITGA7 variant protein p... 31 5.0
AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein. 30 8.8
AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein. 30 8.8
>X06256-1|CAA29601.1| 1049|Homo sapiens protein ( Human mRNA for
integrin alpha 5 subunit. ).
Length = 1049
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMR 222
LWIII+A LFGLLLL ++ I+ K F R
Sbjct: 999 LWIIILAILFGLLLLGLLIYILYKLGFFKR 1028
>M13918-1|AAA52467.1| 1034|Homo sapiens fibronectin receptor
alpha-subunit precursor protein.
Length = 1034
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMR 222
LWIII+A LFGLLLL ++ I+ K F R
Sbjct: 984 LWIIILAILFGLLLLGLLIYILYKLGFFKR 1013
>BC008786-1|AAH08786.1| 1049|Homo sapiens integrin, alpha 5
(fibronectin receptor, alpha polypeptide) protein.
Length = 1049
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMR 222
LWIII+A LFGLLLL ++ I+ K F R
Sbjct: 999 LWIIILAILFGLLLLGLLIYILYKLGFFKR 1028
>M14648-1|AAA36808.1| 1048|Homo sapiens protein ( Human cell adhesion
protein (vitronectin) receptor alpha subunit mRNA,
complete cds. ).
Length = 1048
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNE 249
+W+II+A L GLLLL+++ ++ + F R + Q+ E
Sbjct: 994 VWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1032
>EF560727-1|ABQ59037.1| 1048|Homo sapiens ITGAV protein protein.
Length = 1048
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNE 249
+W+II+A L GLLLL+++ ++ + F R + Q+ E
Sbjct: 994 VWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1032
>BC126231-1|AAI26232.1| 1048|Homo sapiens integrin, alpha V
(vitronectin receptor, alpha polypeptide, antigen CD51)
protein.
Length = 1048
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNE 249
+W+II+A L GLLLL+++ ++ + F R + Q+ E
Sbjct: 994 VWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1032
>AF251841-1|AAG03000.1| 1048|Homo sapiens vitronectin receptor alpha
polypeptide protein.
Length = 1048
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNE 249
+W+II+A L GLLLL+++ ++ + F R + Q+ E
Sbjct: 994 VWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1032
>AC017101-1|AAY24257.1| 1048|Homo sapiens unknown protein.
Length = 1048
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNE 249
+W+II+A L GLLLL+++ ++ + F R + Q+ E
Sbjct: 994 VWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1032
>AB209894-1|BAD93131.1| 1098|Homo sapiens integrin alpha-V precursor
variant protein.
Length = 1098
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNE 249
+W+II+A L GLLLL+++ ++ + F R + Q+ E
Sbjct: 1044 VWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1082
>L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit
protein.
Length = 1025
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 13 ISMESKIEIFPDGLWNGPFSNISLSQSXXXXXXXXXXXXALWIIIVASLFGLLLLSIIYC 192
+S E K + D P +I++ S LW+II+A L GLL+L+I+
Sbjct: 934 VSFEVKKMPYTDQPAKLPEGSIAIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTL 993
Query: 193 IVVKRTNFMRRKNKQK 240
+ K F R + Q+
Sbjct: 994 ALWKCGFFDRARPPQE 1009
>AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 13 ISMESKIEIFPDGLWNGPFSNISLSQSXXXXXXXXXXXXALWIIIVASLFGLLLLSIIYC 192
+S E K + D P +I++ S LW+II+A L GLL+L+I+
Sbjct: 972 VSFEVKKMPYTDQPAKLPEGSIAIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTL 1031
Query: 193 IVVKRTNFMRRKNKQK 240
+ K F R + Q+
Sbjct: 1032 ALWKCGFFDRARPPQE 1047
>Y00796-1|CAA68747.1| 1170|Homo sapiens protein ( Human mRNA for
leukocyte-associated molecule-1 alpha subunit (LFA-1
alpha subunit). ).
Length = 1170
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNELRKVSGG 270
L++ +++ + GLLLL +I+ IV+ + F +R K+K R V G
Sbjct: 1090 LYLYVLSGIGGLLLLLLIF-IVLYKVGFFKRNLKEKMEAGRGVPNG 1134
>DQ131904-1|AAZ38713.1| 1170|Homo sapiens integrin, alpha L (antigen
CD11A (p180), lymphocyte function-associated antigen
protein.
Length = 1170
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNELRKVSGG 270
L++ +++ + GLLLL +I+ IV+ + F +R K+K R V G
Sbjct: 1090 LYLYVLSGIGGLLLLLLIF-IVLYKVGFFKRNLKEKMEAGRGVPNG 1134
>BC050280-1|AAH50280.1| 1137|Homo sapiens integrin, alpha 7 protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1039 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1074
>BC008777-1|AAH08777.1| 1086|Homo sapiens ITGAL protein protein.
Length = 1086
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNELRKVSGG 270
L++ +++ + GLLLL +I+ IV+ + F +R K+K R V G
Sbjct: 1006 LYLYVLSGIGGLLLLLLIF-IVLYKVGFFKRNLKEKMEAGRGVPNG 1050
>AY358882-1|AAQ89241.1| 1141|Homo sapiens ITGA7 protein.
Length = 1141
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1043 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1078
>AJ228836-2|CAB41535.1| 1137|Homo sapiens integrin alpha 7 chain
protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1039 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1074
>AJ228836-1|CAB41534.1| 1141|Homo sapiens integrin alpha 7 chain
protein.
Length = 1141
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1043 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1078
>AF072132-1|AAC80458.1| 1137|Homo sapiens integrin alpha-7 protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1039 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1074
>AF052050-1|AAC18968.1| 1137|Homo sapiens integrin alpha 7 protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1039 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1074
>AF032108-1|AAC39708.1| 1137|Homo sapiens integrin alpha-7 protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1039 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1074
>AC002310-2|AAC31672.1| 1223|Homo sapiens leukocyte
function-associated molecule-1 alpha subunit protein.
Length = 1223
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 133 LWIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKTNELRKVSGG 270
L++ +++ + GLLLL +I+ IV+ + F +R K+K R V G
Sbjct: 1143 LYLYVLSGIGGLLLLLLIF-IVLYKVGFFKRNLKEKMEAGRGVPNG 1187
>AB210036-1|BAE06118.1| 1200|Homo sapiens ITGA7 variant protein
protein.
Length = 1200
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 136 WIIIVASLFGLLLLSIIYCIVVKRTNFMRRKNKQKT 243
W+I++A L GLL+L+++ ++ K F R K+ + T
Sbjct: 1102 WVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEAT 1137
>AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 29.9 bits (64), Expect = 8.8
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 13 ISMESKIEIFPDGLWNGPFSNISLSQSXXXXXXXXXXXXALWIIIVASLFGLLLLSIIYC 192
+S E K + D P +I + S LW+II+A L GLL+L+I+
Sbjct: 972 VSFEVKKMPYTDQPAKLPEGSIVIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTL 1031
Query: 193 IVVKRTNFMRRKNKQK 240
+ K F R + Q+
Sbjct: 1032 ALWKCGFFDRARPPQE 1047
>AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 29.9 bits (64), Expect = 8.8
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 13 ISMESKIEIFPDGLWNGPFSNISLSQSXXXXXXXXXXXXALWIIIVASLFGLLLLSIIYC 192
+S E K + D P +I + S LW+II+A L GLL+L+I+
Sbjct: 972 VSFEVKKMPYTDQPAKLPEGSIVIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTL 1031
Query: 193 IVVKRTNFMRRKNKQK 240
+ K F R + Q+
Sbjct: 1032 ALWKCGFFDRARPPQE 1047
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,798,309
Number of Sequences: 237096
Number of extensions: 1669812
Number of successful extensions: 3358
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3354
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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