Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00531
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 33 0.26
SB_23915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_17327| Best HMM Match : DUF1161 (HMM E-Value=3) 30 1.4
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_19219| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_47975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.2
SB_28315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 29 4.2
SB_47037| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_46967| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-19) 28 5.5
SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5) 28 7.3
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 28 7.3
SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.3
SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 7.3
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 28 7.3
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 7.3
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 28 7.3
SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 7.3
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 7.3
SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34) 28 7.3
SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8) 28 7.3
SB_32624| Best HMM Match : rve (HMM E-Value=0.00042) 28 7.3
SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18) 28 7.3
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068) 28 7.3
SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7) 28 7.3
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -1
Query: 222 IKTSHFHIRIVLSVISFVIVRAIFIVIP--HTLINKLWFHFGS-DSIVLIFVWYRHKFV- 55
+ S F + +++ V+ V+V + + T +N L + + D + L+FV ++ F+
Sbjct: 598 VLASVFAVLVLIGVVGNVLVCLVILRFSSMRTPMNYLLLNLAAADLLTLLFVSPQYVFIH 657
Query: 54 -FCRTRGTCFQWIYAFSFR 1
F G CF + +AF+FR
Sbjct: 658 TFVHPIGECFSFFFAFAFR 676
>SB_23915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 210 HFHIRIVLSVISFVIVRAIFIVIPHTLINKL 118
HF R VL V+ FV V +I IV+P+ L+ +L
Sbjct: 130 HFGPRTVLGVVVFVWVLSIAIVLPYMLVLRL 160
>SB_17327| Best HMM Match : DUF1161 (HMM E-Value=3)
Length = 345
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 186 SVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRHKFVFCRTRG--TCFQWIY 16
+++S + I I +T NKL H +D VL ++ K CR +G T FQ +Y
Sbjct: 178 TIVSKCVTSYISEFIGNTSTNKLDVHCTADKAVLSYIVMDRKLNVCRWQGYWTLFQLLY 236
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 300 TSCRGRPVIVYQNYRFHLHQKYGEKTSWRCAKWRNGFCRSSI 425
T C P+I QNY H Q + + W N C + +
Sbjct: 911 TQCFSAPIITEQNYHSHSSQSTEDPVVGKAQAWGNQSCYNGV 952
>SB_19219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 300 TSCRGRPVIVYQNYRFHLHQKYGEKTSWRCAKWRNGFCRSSI 425
T C P+I QNY H Q + + W N C + +
Sbjct: 86 TQCFSAPIITEQNYHSHSSQSTEDPVVGKAQAWGNQSCYNGV 127
>SB_47975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 20 IHWKQVPLVLQKTNL*RYQTK 82
+H++ +P V+QKTNL RY K
Sbjct: 24 VHFRSMPRVVQKTNLTRYNLK 44
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 269 SRRCTRSILRNLVPWPTGNCVSELPVSFAPEIRREN 376
+R C R I + V + TG+C ELP+SF P R+ N
Sbjct: 1410 ARLCLRGIEAS-VDYNTGSC--ELPISFIPHHRKPN 1442
>SB_28315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 260 RWSSRRCTRSILRNLVPWPTGNCVSELPVSFAPEIRREN 376
+WSS C++++++N + P +C+ +LP P+ N
Sbjct: 31 QWSS--CSKNVIQNFLSGPGSSCLKDLPPVPRPQFPHTN 67
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 386 VRQMEERILQIFDSYVRRHHCKTRETSQSRLNLIHKQTSKPTPL 517
VR+M + + H +TR + S N IHK T +PTPL
Sbjct: 169 VREMSKMFEREISLLKPADHIRTRAATDSYKNRIHK-TGRPTPL 211
>SB_47037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 359 EIRRENLMEVRQMEERILQIFDSYVRRHHCKTRETSQSRLNLIHKQTSKPTPLHSS 526
E RR+ E + EER+ +I + + R+ + R+ I K+T+ P+PL ++
Sbjct: 126 ESRRQEARE--RNEERLSEIGELERENRELENRKPLRERIKAIFKKTALPSPLSAT 179
>SB_46967| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-19)
Length = 341
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 249 NINISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVW 73
NI+ C A+ + I + V+ +I+I H + KLW SIVL VW
Sbjct: 96 NIHHKVCLAMDITSRFIAYSTVLHLLVVTLERYIMIVHAMKYKLWITKKRTSIVLTSVW 154
>SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5)
Length = 722
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 201 IRIVLSVISFVIVRAIFIVIPHTLINKLWFHFG 103
I V+ +I I+ I I+I +IN+L+ H G
Sbjct: 684 IVFVIIIIIITIITTIIIIITIAIINRLYHHHG 716
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 745 ARHKAADAISRHPTGSTTPEMMTLPDD 771
>SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 347
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 282 QDPFFGTSCRGRPVIVYQNYRFHLHQKYGEKTSWRCAKWRNGFCRS 419
+ PF C G+ N FH+H + EK + C + GFCR+
Sbjct: 281 EKPFKCHIC-GKAFHQVYNLTFHMHT-HNEKKPFTCLECGKGFCRN 324
>SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 325
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 234 ARHKAADAISRHPTGSTTPEMMTLPDD 260
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 392 GAPP*GFLSVFLVQMKPVILIHNYRSATARGSEEW 288
GAP G + +FLV + + L + SA RG +EW
Sbjct: 467 GAPNFGSMVLFLVSVLMIDLFPSTGSAANRGPKEW 501
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 679 ARHKAADAISRHPTGSTTPEMMTLPDD 705
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 612 VPIDGYIQDPEGTKMVTD*SVEHVSPSYLDECRG-VGLL 499
V DGY DP G K VTD ++ P + E R VGLL
Sbjct: 1422 VSADGYRVDPSGIKAVTD--LKTAKPQTVKEVRRIVGLL 1458
>SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 398
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 172 ARHKAADAISRHPTGSTTPEMMTLPDD 198
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 93 ARHKAADAISRHPTGSTTPEMMTLPDD 119
>SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34)
Length = 1236
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = -3
Query: 328 TITGRPRHEVPKNGSCASPTAPPS--PQKYXXXXXXXXXXXSFPY*NRPLRN*FRHCSCH 155
T TG P ++G+ +PT PS + + NR L + FR S
Sbjct: 888 TTTGNPALPQKQSGTTGNPTPSPSCNDLRVIIHVEGCVHQHALLVRNRSLDSQFRITSFD 947
Query: 154 LHRHPTYSH*QTLV-PFWERQHCSHLRLVSSQIRLLQN 44
+ R+P+ + +V P + ++HCS+ + S + N
Sbjct: 948 MSRYPSETRTDVVVPPEFLQKHCSYRGVSDSSTKHFVN 985
>SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 51 ARHKAADAISRHPTGSTTPEMMTLPDD 77
>SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 209 ARHKAADAISRHPTGSTTPEMMTLPDD 235
>SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8)
Length = 420
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 272 ARHKAADAISRHPTGSTTPEMMTLPDD 298
>SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)
Length = 415
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 93 ARHKAADAISRHPTGSTTPEMMTLPDD 119
>SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)
Length = 838
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 286 ARHKAADAISRHPTGSTTPEMMTLPDD 312
>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
Length = 1502
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 1 AKRKCVDPLEAGPSGSAKDEFVTIPDE 81
A+ K D + P+GS E +T+PD+
Sbjct: 999 ARHKAADAISRHPTGSTTPEMMTLPDD 1025
>SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7)
Length = 364
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 252 WGEGGAVGDAQDPFFGTSCRGRPVIVYQNYRF 347
WG+ G+V DA DP GT G V+ Y N+ +
Sbjct: 54 WGQSGSVNDAYDP--GT---GDLVMAYTNFNY 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,320,012
Number of Sequences: 59808
Number of extensions: 458275
Number of successful extensions: 1498
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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