Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00530X
         (401 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P03749 Cluster: Host specificity protein J; n=98; root|...    34   1.2  
UniRef50_A6NWJ5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_A6H009 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_Q5A0Q9 Cluster: Putative uncharacterized protein; n=2; ...    33   1.6  
UniRef50_A6DNM9 Cluster: Putative uncharacterized protein; n=1; ...    32   4.9  
UniRef50_UPI00006CE505 Cluster: hypothetical protein TTHERM_0014...    31   6.4  
UniRef50_Q55G82 Cluster: Putative uncharacterized protein; n=1; ...    31   6.4  
UniRef50_Q4RR01 Cluster: Chromosome 14 SCAF15003, whole genome s...    31   8.5  
UniRef50_Q7NAT3 Cluster: Predicted permease; n=1; Mycoplasma gal...    31   8.5  

>UniRef50_P03749 Cluster: Host specificity protein J; n=98; root|Rep:
            Host specificity protein J - Bacteriophage lambda
          Length = 1132

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -2

Query: 283  LTFTLSRTLKTFTKLTVYCMFTLKLFLSGLYVHRGTENNSKSLDQDVLDAPTTRRNHVIF 104
            L  T   + +T +  T Y M  LK+ ++G  ++ G  N +  +   ++D P  R N ++ 
Sbjct: 1037 LPLTFRGSKRTVSGRTTYSMCYLKVLMNGAVIYDGAANEAVQVFSRIVDMPAGRGNVILT 1096

Query: 103  F 101
            F
Sbjct: 1097 F 1097


>UniRef50_A6NWJ5 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 576

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 49  SVVDRFYDSRERSACDGKRK*RDCVL*SARREHLGLVT*NYFLYHD 186
           S++ RF+D +E S C G    +DC   S  + +L +V  N +L+HD
Sbjct: 376 SLIARFWDVQEGSVCVGGTDVKDCTADSLLK-NLSMVFQNVYLFHD 420


>UniRef50_A6H009 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium psychrophilum JIP02/86|Rep: Putative
           uncharacterized protein - Flavobacterium psychrophilum
           (strain JIP02/86 / ATCC 49511)
          Length = 1508

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = -2

Query: 364 INSNYSNLDVVGTAALAANVPTPYKFELTFTLSRTLKTFTKLTVYCMFTLKLFLSGL 194
           I+S Y+NL+ +    L  N+PT +K   TFT+S T +   K T+     LK  L  +
Sbjct: 347 ISSTYNNLNAILPRVLGNNLPTTFKKFGTFTISGTTEVTLK-TIKAAVLLKTALGNV 402


>UniRef50_Q5A0Q9 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 130

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = -2

Query: 364 INSNYSNLDVVGTAALAANVPTPYKFELTFTLSRTLKTFTKLTVYCMFTLKLFLSGLYVH 185
           IN+ +S +D++   A+ + +  PY   L     R + T +  T  C F    F +   ++
Sbjct: 6   INNIFSPIDIISLEAICSFLKWPY--FLVSWFDRDVSTCS--TFNCKFQTVHFQTFNIIN 61

Query: 184 RGTENNSKSLDQDVLD--APTTRRNHVIFFY 98
           + T+ NSK  +       +PT +  H++FF+
Sbjct: 62  KATKKNSKQKNHKPTPYLSPTHKLKHLLFFF 92


>UniRef50_A6DNM9 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 503

 Score = 31.9 bits (69), Expect = 4.9
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -2

Query: 178 TENNSKSLDQDVL--DAPTTRRNHVIFFYRRKLSVLESRR 65
           +EN+S S+DQ  L  D PT R  H+ F YRR  +  +S R
Sbjct: 70  SENSSLSVDQQKLAIDLPTKRLKHINFTYRRLANEQKSIR 109


>UniRef50_UPI00006CE505 Cluster: hypothetical protein
           TTHERM_00140930; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00140930 - Tetrahymena
           thermophila SB210
          Length = 862

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +3

Query: 135 ASRTSWSSDLELFSVPRCTYKPERNSFNVNIQ*TVSLVKVFNVLDN-VKVNSNLYGVGTF 311
           ASR  W +D  +F +   +      +FN  IQ     V  F++ DN  +   N++     
Sbjct: 223 ASRMEWENDSSIFQIKNSSKYESNKNFNKQIQENERNVDYFSIYDNPYQDRQNIFKTLKI 282

Query: 312 AARAAVPT 335
           +    +PT
Sbjct: 283 SEPQTIPT 290


>UniRef50_Q55G82 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1426

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
 Frame = -2

Query: 388  VPLYRNGAINSNYSNLDVVGTAALAANVPTPYKFELTFT-LSRTLKTFTKLTVYCMFTLK 212
            V LY + +I  N S + +  + A      TP   +  FT +S   KT +   ++ +  L 
Sbjct: 776  VHLYYSKSI-INQSKVSITHSIATLLQTNTPNILDKIFTGISHRSKTVSSFCLFILLQLM 834

Query: 211  LFLSGLYVHRGTENNSKSLDQDVLDAPTTRRNHVIFFYRRKLSV 80
                GL VH   +  + +L   V     ++  HV F  RR  SV
Sbjct: 835  SNQEGLAVHNCLKAENSNLYGRVKKICDSKLKHVQFAARRLFSV 878


>UniRef50_Q4RR01 Cluster: Chromosome 14 SCAF15003, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 14
           SCAF15003, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 155

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -2

Query: 382 LYRNGAINSNYSNLDVVGTAALAANVPTPYKFELTFTLSRTLKTFTK 242
           L  N A+NS+Y   +V G  + A +VP P K     T  R    FT+
Sbjct: 23  LQMNSAVNSDYGASEVTGYFSAANSVPKPDKCVAILTHRRKRTNFTQ 69


>UniRef50_Q7NAT3 Cluster: Predicted permease; n=1; Mycoplasma
           gallisepticum|Rep: Predicted permease - Mycoplasma
           gallisepticum
          Length = 500

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 256 KTFTKLTV-YCMFTLKLFLSGLYVHRGTENNSKSLDQDVLDAPTTRRNHVIFFYR 95
           K + KL V Y +F L +FL   Y  RGT +N  +LD+++L  P +    V  F+R
Sbjct: 74  KGYKKLFVFYSIFWLPIFLVRSY--RGTLHNDLALDRNLLFLPLSLYGFVGIFFR 126


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,372,824
Number of Sequences: 1657284
Number of extensions: 6289768
Number of successful extensions: 14518
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14517
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)