Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00527
(677 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 32 0.066
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.15
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 30 0.27
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 30 0.35
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 29 0.47
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 29 0.62
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 1.1
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 27 1.9
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 1.9
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 27 2.5
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 27 3.3
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 27 3.3
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 27 3.3
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 26 4.4
SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 4.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 4.4
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 5.8
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 25 7.6
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.6
SPBC19C2.02 |pmt1||DNA methyltransferase homolog|Schizosaccharom... 25 7.6
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 7.6
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 25 7.6
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 32.3 bits (70), Expect = 0.066
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -3
Query: 522 SRMDSCVSSPNSSIYNNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIG 343
S +DS SPN + N + NEN+ + D E + ++ ++ E+A+ N + D
Sbjct: 60 SPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENE-EEADANEEEEEDEE 118
Query: 342 ENNEDFEDYD 313
++ ED ED D
Sbjct: 119 DDEEDEEDED 128
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 31.1 bits (67), Expect = 0.15
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -3
Query: 510 SCVSSPNSSIY-NNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENN 334
+C++ +S Y N+ L + K++ +PD+P+S ++S+ E + N D E N
Sbjct: 116 ACLAQLDSYSYPNHKLEIHVYKHI---LPDLPQSSEVDRNSETEGTREENSNTSDWDEQN 172
Query: 333 EDFEDYDADF 304
E + + D+
Sbjct: 173 EYVSEVEGDY 182
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 30.3 bits (65), Expect = 0.27
Identities = 22/92 (23%), Positives = 36/92 (39%)
Frame = -3
Query: 516 MDSCVSSPNSSIYNNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGEN 337
M++ VS+ NS N L + I + K KN + +KNN P N
Sbjct: 1 METTVSAKNSLENENFLKEKSETVFLDEAA-ITKPPASKKKRKNRKKKKNNGPSEQFVGN 59
Query: 336 NEDFEDYDADFETKTSADDSGNMLEEISSALK 241
N+ E ++K ++E+ +A K
Sbjct: 60 NDLEEQRSGSIDSKDKEKPLDEKVKELENANK 91
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 29.9 bits (64), Expect = 0.35
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -3
Query: 504 VSSPNSSIYNNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNEDF 325
V SPN S+ N++++ +K + P + + A N P +IG N+
Sbjct: 389 VDSPNKSLVNDNVSAKHDKESENGKSKFPPPSQTLVTTSTISAAGNE-PSDEIGSENDSD 447
Query: 324 EDYDAD 307
D D+D
Sbjct: 448 SDSDSD 453
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -3
Query: 522 SRMDSCVSSPNSSIYNNSLNDNENKYLASHIPDIPESCNEMKHS----KNEQAEKNNLP 358
S D+ V+SPN+S +++ + YL+ + E +++K S N Q + +N P
Sbjct: 15 SEKDTTVNSPNASSFSSFFKKSSQTYLSKRSEKLNEHNSKLKSSGSFTSNSQTDLSNSP 73
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 29.1 bits (62), Expect = 0.62
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -3
Query: 438 SHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNEDFEDYDADFETKTSADDSGNMLEE 259
S I + K K +Q +K K D+ + D E + E+ + DD + +E+
Sbjct: 87 SPIVSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSSDNEKLEG-LESSKNIDDDIDEIEK 145
Query: 258 ISSALKIK 235
++ LK+K
Sbjct: 146 AAAELKLK 153
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -3
Query: 501 SSPNSSIYNNSLNDNENKY---LASHIPDIPES-CNEMKHSKNEQAEKNNLPKHDIGENN 334
++ NS YNN+ + N N+ +S + + S N + N+Q NN ++ NN
Sbjct: 567 NNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNN 626
Query: 333 EDFEDYDADFETKTSADDSGNMLEEISSALK 241
+++ + + + S SG + + ++ LK
Sbjct: 627 QNYNNNNNSSQGGNSQGGSGLLGQAVNMFLK 657
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Frame = -3
Query: 522 SRMDSCVSSPNSSIYNNSLNDNENKYLASHIPDIPESCNEM-----KHSKNEQAEKNNLP 358
S +S S+ NS+ NN+ N + N+ + S + + + ++ N + N
Sbjct: 516 SSNNSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMASSFLGSSGNNNNNNNSNSGNYN 575
Query: 357 KHDIGENNEDFEDYDADFETKTSA---DDSGN 271
++ G NN+ + + + S+ SGN
Sbjct: 576 NNNSGNNNQQHQQSSSSLQGLASSFLNSSSGN 607
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -3
Query: 480 YNNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNE 331
YN SL N+N + +P PE E++ + E+ ++ EN++
Sbjct: 553 YNQSLQQNKNNEPTAVVPLEPEQTVELETRNFRREERAKWRMQELNENSQ 602
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 480 YNNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEK 370
Y SL DN+ LA++ DI +MKH +N ++K
Sbjct: 200 YKASLKDNKIVVLANNDQDINAMLEKMKHIENLVSQK 236
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -3
Query: 522 SRMDSCVSSPNSSIYNNSLNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIG 343
S ++SC++ ++D+E+ + + D+PES E+ E A P D G
Sbjct: 241 SLLESCLTDDTDDF--ELMSDHEDTFTMGKVADLPESSVELV----EDAASIQRPNSDFG 294
Query: 342 ENNEDFED 319
N++ D
Sbjct: 295 ACNDNSLD 302
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -1
Query: 650 TISNSVNNDSYDALDRSD----NDPK--GRSKIDDYYN-FTNASSITIDCPEWIHAFRL 495
TIS+S+N Y ++D N+P G S +D FT S T D PEW ++ L
Sbjct: 203 TISSSMNEFCYPKNGQTDVFAFNEPAYFGSSDLDQSSPLFTGVFSSTDDIPEWASSWYL 261
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 414 SCNEMKHSKNEQAEKNNLPKHDIGENNEDFE 322
S ++ KH KNE AE NL + ED++
Sbjct: 281 STDDTKHYKNEWAESINLDNFNRPSQQEDYD 311
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 453 NKYLASHIPDIPESCNEMKHSKNEQ-AEKNNLPKHD 349
NKYL + + IP+ KNE+ A N+LPK +
Sbjct: 184 NKYLTNLMTKIPDDQLPKPQPKNEEPAAPNDLPKQE 219
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -1
Query: 650 TISNSVNNDSYDALDRSD----NDPK--GRSKIDDYYN-FTNASSITIDCPEWIHAFRL 495
TIS+S+N Y ++D N+P G S +D FT S T D PEW ++ L
Sbjct: 203 TISSSMNEFCYPKNGQTDVFAFNEPAYFGSSDLDQSSPLFTGVFSSTDDIPEWASSWYL 261
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 653 ETISNSVNNDSYDALDRSDNDPKGRSKIDDYYNFTNASSITI 528
ET SN S+D + D+ K ++ ++YN N + TI
Sbjct: 215 ETSSNQ-EESSFDRQETQDDKQKPKTTQQEHYNLRNRNQATI 255
>SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/64 (21%), Positives = 25/64 (39%)
Frame = +3
Query: 234 FLFSMHCLFLPTCFRCHLRLFLSQSQRHNLRNLHYFHRYRVSVNYSSLPVHFLNVSFHYT 413
F M + CF L L LH+FH + ++ + SL + + + YT
Sbjct: 28 FFLQMTPFYSILCFLSFFALLLHLPCSIYSHTLHFFHHFTIACYHYSLCLSLVALLLFYT 87
Query: 414 IQEY 425
+ +
Sbjct: 88 LYPF 91
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 474 NSLNDNENKYLASHIPDIPES-CNEMKHSKNEQAEKNNLPKHDIGENNEDFEDYDADFET 298
NS ++ EN+ L + DIPE N + ++ + +L + + N + + ++D +
Sbjct: 3974 NSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVS 4033
Query: 297 KTSADDSGNMLEE 259
K +D LE+
Sbjct: 4034 K---EDDNKALED 4043
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 441 ASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNEDFED 319
AS + D E +E +KN +E N K D+GE E ++
Sbjct: 390 ASDVSDTAE-ISEKTEAKNADSEANLEEKSDVGEEKESKDE 429
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = -3
Query: 471 SLNDNENKYLASHIPDIPESCNEM--KHSKNEQAEK--NNLPKHDIGENNEDFED 319
SL +ENK L++ + + + NE+ K SK + E+ NL H+ + + FED
Sbjct: 1220 SLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNL-MHEYSQLGKTFED 1273
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 330 DFEDYDADFETKTSADDSGNMLEEISSA 247
D E YD DF+T+ D+ +++I SA
Sbjct: 540 DLEFYDLDFDTEKKEPDALANVQQIGSA 567
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -3
Query: 456 ENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNEDFEDYDADFETKTSADDS 277
+N L I +I + +E PK +I NE+FE+ + ++T+ ++
Sbjct: 605 QNLQLEDEISEISSPSYSSDDDRKTISETQPAPKQNI---NEEFENSTSTDGSETNKNEQ 661
Query: 276 GNML 265
GN L
Sbjct: 662 GNSL 665
>SPBC19C2.02 |pmt1||DNA methyltransferase
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 369 NNLPKHDIGENNEDFEDYDADFETKTSADDSG-NMLEEISS 250
NNLP++ + EN + FE+ A E + + G N++E I S
Sbjct: 112 NNLPEYILIENVQGFEESKAAEECRKVLRNCGYNLIEGILS 152
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = -3
Query: 432 IPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNEDFEDYDADFETKTSADDSGNMLEEIS 253
IPD N++KH + E + PK N E+ + + S+ ++ + L IS
Sbjct: 526 IPDYCGMSNDLKHQLLTELEVSKRPKKPELPNQENKTTNEKVYRKPLSSQNTFDTLPTIS 585
Query: 252 SALKIKT 232
L T
Sbjct: 586 QGLLAAT 592
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = -3
Query: 468 LNDNENKYLASHIPDIPESCNEMKHSKNEQAEKNNLPKHDIGENNEDFEDYDADFE 301
+ + E+ L +++ D+ E++HS E E+NN H + + +D+D + E
Sbjct: 69 IEEEEDPDLEAYLSDLERE--ELEHSLEELDEENNYKLH-LRYSFSQLQDFDEENE 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,468,584
Number of Sequences: 5004
Number of extensions: 53712
Number of successful extensions: 239
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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