Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00526
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047659-11|AAC04428.1| 182|Caenorhabditis elegans Hypothetical... 149 2e-36
AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical ... 63 2e-10
AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical... 48 1e-05
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 32 0.43
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 32 0.43
U23524-5|AAC46821.2| 252|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 31 0.99
U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical pr... 29 4.0
U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of... 29 4.0
J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein ( C.ele... 29 4.0
Z92812-6|CAB07280.1| 372|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81070-4|CAB03003.2| 474|Caenorhabditis elegans Hypothetical pr... 28 7.0
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical ... 28 9.2
AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF tra... 28 9.2
>AF047659-11|AAC04428.1| 182|Caenorhabditis elegans Hypothetical
protein K07H8.3 protein.
Length = 182
Score = 149 bits (362), Expect = 2e-36
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 259 DLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRH 438
DLM+MQ+ NL+CLPENYQMKYYFYH LSWPQLSY+AED KG++VGYVLAKMEED + H
Sbjct: 10 DLMSMQNANLMCLPENYQMKYYFYHALSWPQLSYIAEDHKGNVVGYVLAKMEEDPGEEPH 69
Query: 439 GHITSLAVKRSHRRLGLAQKLMNR 510
GHITSLAVKRS+RRLGLA K+M++
Sbjct: 70 GHITSLAVKRSYRRLGLANKMMDQ 93
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +3
Query: 486 ISSETHESASLAMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAY 665
++++ + + AMVE + AKYVSLHVR SNRAALNLY N+L F+I++ EPKYYADGEDAY
Sbjct: 86 LANKMMDQTARAMVETYNAKYVSLHVRVSNRAALNLYKNTLKFEIVDTEPKYYADGEDAY 145
Query: 666 SMMRDLSAFAVDNKTD 713
+M RDL+ +A + +
Sbjct: 146 AMRRDLAKWAEERNIE 161
>AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical
protein Y97E10AL.3 protein.
Length = 173
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 259 DLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGED-NR 435
D+ + NL E Y ++Y ++ +++P+ VAE G I+ YV+ K+E G D N
Sbjct: 11 DMFKFNNVNLDINTETYGFQFYLHYMMNYPEYYQVAEHPNGEIMAYVMGKIE--GRDTNW 68
Query: 436 HGHITSLAVKRSHRRLGLAQKLM 504
HGH+T+L+V + RRLGLA +M
Sbjct: 69 HGHVTALSVAPNFRRLGLAAYMM 91
>AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical
protein B0238.10 protein.
Length = 278
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 295 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHI-VGYVLAKMEEDGEDNRHGHITSLAVKRS 471
L E Y + Y Y +WP+ ++A D+ + +G VL K+E D G++ LAV S
Sbjct: 117 LSEPYSIYTYRYFLHNWPEYCFLAYDQTNNTYIGAVLCKLELDMYGRCKGYLAMLAVDES 176
Query: 472 HRRLGLAQKLMNR 510
RRLG+ +L+ R
Sbjct: 177 CRRLGIGTRLVRR 189
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 459 CKEITS*IRISSETHESASLAMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPK 638
C+E + SS S S ++EC ++ L + N A + ++ L ++ ++ P
Sbjct: 625 CQETNYEVTYSSARWPSGSAKVMECLPGDFLCLEKYRKNAAMVQIFYEELNYETMQESPA 684
Query: 639 Y 641
Y
Sbjct: 685 Y 685
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 459 CKEITS*IRISSETHESASLAMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPK 638
C+E + SS S S ++EC ++ L + N A + ++ L ++ ++ P
Sbjct: 587 CQETNYEVTYSSARWPSGSAKVMECLPGDFLCLEKYRKNAAMVQIFYEELNYETMQESPA 646
Query: 639 Y 641
Y
Sbjct: 647 Y 647
>U23524-5|AAC46821.2| 252|Caenorhabditis elegans Hypothetical
protein C29F5.2 protein.
Length = 252
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 262 LMNMQHCNLLCLPENYQMKYYFYHGLS 342
++++QHC L C NY +Y + GLS
Sbjct: 119 IVDLQHCTLPCKSINYNFHFYSFKGLS 145
>Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical
protein F13G3.3 protein.
Length = 501
Score = 31.1 bits (67), Expect = 0.99
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 549 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRDLSAFAVDNKTDSNATD 728
VSLHV K A ++LY S+ +LEI Y +G ++ D + D N
Sbjct: 171 VSLHVYKIFGAHMHLYIRSIVSPMLEILRVYEQEGYATLKPWNRINLLNRDEQ-DFNPNL 229
Query: 729 NLEIKSESA 755
N+E +S++A
Sbjct: 230 NVEFRSQAA 238
>U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical
protein F54E7.9 protein.
Length = 167
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 546 YVSLHVRKSNRAALNLYTNSLGFKILEIEPKYY--ADGEDAYSMMR 677
+ LHV+ SN+ A+ Y N GF + + P+YY DA+ M +
Sbjct: 120 HAMLHVQTSNKTAIEFYKNR-GFNVDCLVPQYYQRCSPPDAFIMRK 164
>Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical
protein F30F8.10b protein.
Length = 215
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 430 NRH-GHITSLAVKRSHRRLGLAQKLMN 507
N H +I S+AV + RRLGLA +L+N
Sbjct: 94 NAHVAYILSIAVDKKFRRLGLATRLLN 120
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 549 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGE 656
V LHV +N AAL+ Y GF+ P+YY GE
Sbjct: 136 VFLHVLSTNSAALSFY-KMHGFEFHASLPEYYRIGE 170
>Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical
protein F30F8.10a protein.
Length = 242
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 430 NRH-GHITSLAVKRSHRRLGLAQKLMN 507
N H +I S+AV + RRLGLA +L+N
Sbjct: 121 NAHVAYILSIAVDKKFRRLGLATRLLN 147
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 549 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGE 656
V LHV +N AAL+ Y GF+ P+YY GE
Sbjct: 163 VFLHVLSTNSAALSFY-KMHGFEFHASLPEYYRIGE 197
>U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 1, isoform a protein.
Length = 656
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 GH--IVGYVLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLM 504
GH IV Y+L K + NRHGH T L + ++G+ ++L+
Sbjct: 134 GHLDIVKYLLEKGADPHIPNRHGH-TCLMIASYRNKVGIVEELL 176
>J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein (
C.elegans fem-1 gene,complete cds. ).
Length = 656
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 GH--IVGYVLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLM 504
GH IV Y+L K + NRHGH T L + ++G+ ++L+
Sbjct: 134 GHLDIVKYLLEKGADPHIPNRHGH-TCLMIASYRNKVGIVEELL 176
>Z92812-6|CAB07280.1| 372|Caenorhabditis elegans Hypothetical
protein T03E6.6 protein.
Length = 372
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 146 VLEQIEIWINSTSKQC-TNFKI*LIGEV 66
+L+Q E W NST +C T F I LI EV
Sbjct: 109 ILQQNECWQNSTYLKCLTTFTINLIAEV 136
>Z81070-4|CAB03003.2| 474|Caenorhabditis elegans Hypothetical
protein F26E4.5 protein.
Length = 474
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 195 GCLTSDAGGVSDIPPSSSRTNRNLDKQHFQTMYQLQNLINW 73
G TS + V + P+ ++N +L K H +L+ + NW
Sbjct: 38 GASTSLSKSVEESAPNKDKSNSSLVKSHHVLKIKLKKITNW 78
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 283 NLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLA 459
NL+ + E Y+ +YY G + L + G+IVGY + ++ ++ +GH+ S A
Sbjct: 432 NLVPIRELYKDRYYVVAGNDYQYLIDDGYNITGNIVGYTV-DCKDSKDEFVYGHLPSYA 489
>Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 298 PENYQMKYYFYHGLS-WPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHG 441
P N + +F+ ++ + + S E E+ G+V + E DG+D R+G
Sbjct: 62 PNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNG 110
>AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 298 PENYQMKYYFYHGLS-WPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHG 441
P N + +F+ ++ + + S E E+ G+V + E DG+D R+G
Sbjct: 62 PNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNG 110
>AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF
transcription factor protein.
Length = 491
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 298 PENYQMKYYFYHGLS-WPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHG 441
P N + +F+ ++ + + S E E+ G+V + E DG+D R+G
Sbjct: 62 PNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNG 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,768,630
Number of Sequences: 27780
Number of extensions: 335147
Number of successful extensions: 865
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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