Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00526
         (816 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putat...   134   5e-32
At1g03150.1 68414.m00292 GCN5-related N-acetyltransferase (GNAT)...    68   7e-12
At2g38130.2 68415.m04681 GCN5-related N-acetyltransferase, putat...    43   3e-04
At2g38130.1 68415.m04680 GCN5-related N-acetyltransferase, putat...    43   3e-04
At1g03650.1 68414.m00344 GCN5-related N-acetyltransferase (GNAT)...    36   0.024
At5g49160.1 68418.m06085 DNA (cytosine-5-)-methyltransferase (AT...    29   3.7  
At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase, pu...    28   6.4  
At2g06025.1 68415.m00659 GCN5-related N-acetyltransferase (GNAT)...    28   8.5  

>At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putative
           similar to SP|P07347 N-terminal acetyltransferase
           complex ARD1 subunit (Arrest-defective protein 1)
           {Saccharomyces cerevisiae}; contains Pfam profile
           PF00583: acetyltransferase, GNAT family
          Length = 192

 Score =  134 bits (325), Expect = 5e-32
 Identities = 63/85 (74%), Positives = 69/85 (81%)
 Frame = +1

Query: 250 TTSDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGED 429
           T  DL+ MQ CNL+CLPENYQMKYY YH LSWPQL YVAED  G IVGYVLAKMEE+  +
Sbjct: 8   TVDDLLAMQACNLMCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNE 67

Query: 430 NRHGHITSLAVKRSHRRLGLAQKLM 504
             HGHITSLAV R+HR+LGLA KLM
Sbjct: 68  -CHGHITSLAVLRTHRKLGLATKLM 91



 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 37/66 (56%), Positives = 53/66 (80%)
 Frame = +3

Query: 486 ISSETHESASLAMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAY 665
           ++++   +A  AM + ++A+YVSLHVR+SNRAA NLYT +LG+KI ++E KYYADGEDAY
Sbjct: 86  LATKLMTAAQAAMEQVYEAEYVSLHVRRSNRAAFNLYTETLGYKINDVEAKYYADGEDAY 145

Query: 666 SMMRDL 683
            M ++L
Sbjct: 146 DMRKNL 151


>At1g03150.1 68414.m00292 GCN5-related N-acetyltransferase (GNAT)
           family protein similar to SP|P07347 N-terminal
           acetyltransferase complex ARD1 subunit (Arrest-defective
           protein 1) {Saccharomyces cerevisiae}; contains Pfam
           profile PF00583: acetyltransferase, GNAT family
          Length = 174

 Score = 68.1 bits (159), Expect = 7e-12
 Identities = 32/84 (38%), Positives = 49/84 (58%)
 Frame = +1

Query: 256 SDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNR 435
           +DL+     NL  L E + M +Y  +   WP   +VAE     ++GY++ K+E  GE + 
Sbjct: 10  NDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRVMGYIMGKVEGQGE-SW 68

Query: 436 HGHITSLAVKRSHRRLGLAQKLMN 507
           HGH+T++ V   +RR  LA+KLMN
Sbjct: 69  HGHVTAVTVSPEYRRQQLAKKLMN 92



 Score = 33.9 bits (74), Expect = 0.13
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 537 QAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRDLS 686
           +A +V L VR SN  A+ +Y   LG+ I     +YY+  ED   M + LS
Sbjct: 103 KAYFVDLFVRASNTPAIKMY-EKLGYIIYRRVLRYYSGEEDGLDMRKALS 151


>At2g38130.2 68415.m04681 GCN5-related N-acetyltransferase, putative
           similar to SP|Q03503 L-A virus GAG protein
           N-acetyltransferase (EC 2.3.1.-) {Saccharomyces
           cerevisiae}; contains Pfam profile PF00583:
           acetyltransferase, GNAT family
          Length = 190

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 26/72 (36%), Positives = 39/72 (54%)
 Frame = +1

Query: 295 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAVKRSH 474
           L E Y +  Y Y    WPQL ++A   KG  VG ++ KM +  +  R G+I  L V + +
Sbjct: 38  LSEPYSIFTYRYFVYLWPQLCFLAF-HKGKCVGTIVCKMGDHRQTFR-GYIAMLVVIKPY 95

Query: 475 RRLGLAQKLMNR 510
           R  G+A +L+ R
Sbjct: 96  RGRGIASELVTR 107


>At2g38130.1 68415.m04680 GCN5-related N-acetyltransferase, putative
           similar to SP|Q03503 L-A virus GAG protein
           N-acetyltransferase (EC 2.3.1.-) {Saccharomyces
           cerevisiae}; contains Pfam profile PF00583:
           acetyltransferase, GNAT family
          Length = 190

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 26/72 (36%), Positives = 39/72 (54%)
 Frame = +1

Query: 295 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAVKRSH 474
           L E Y +  Y Y    WPQL ++A   KG  VG ++ KM +  +  R G+I  L V + +
Sbjct: 38  LSEPYSIFTYRYFVYLWPQLCFLAF-HKGKCVGTIVCKMGDHRQTFR-GYIAMLVVIKPY 95

Query: 475 RRLGLAQKLMNR 510
           R  G+A +L+ R
Sbjct: 96  RGRGIASELVTR 107


>At1g03650.1 68414.m00344 GCN5-related N-acetyltransferase (GNAT)
           family protein low similarity to SP|P07347 N-terminal
           acetyltransferase complex ARD1 subunit (Arrest-defective
           protein 1) {Saccharomyces cerevisiae}; contains Pfam
           profile PF00583: acetyltransferase, GNAT family
          Length = 158

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 549 VSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRD 680
           VSLHV  +  +A+NLY   LGF++  +   YY+   DAY M  D
Sbjct: 111 VSLHVDPTRTSAVNLY-KKLGFQVDCLVKSYYSADRDAYRMYLD 153


>At5g49160.1 68418.m06085 DNA (cytosine-5-)-methyltransferase
           (ATHIM) identical to SP|P34881 DNA
           (cytosine-5)-methyltransferase AthI (EC 2.1.1.37)
           {Arabidopsis thaliana}
          Length = 1534

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 460 VKRSHRRLGLAQKLMNRHHLQWL 528
           VKR    +GLA KL +RHH +W+
Sbjct: 574 VKRCPFVVGLASKLEDRHHTKWI 596


>At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase,
           putative similar to cytosine-5 methyltransferase (METII)
           [Arabidopsis thaliana] GI:6523846; contains Pfam
           profiles PF01426: BAH domain, PF00145: C-5
           cytosine-specific DNA methylase
          Length = 1404

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 460 VKRSHRRLGLAQKLMNRHHLQWLNAFRQNM 549
           +KR     GLA K+ +RHH +W+   ++ M
Sbjct: 461 IKRCPFVTGLASKMQDRHHTKWIIKKKRKM 490


>At2g06025.1 68415.m00659 GCN5-related N-acetyltransferase (GNAT)
           family protein low similarity to streptothricin
           acetyltransferase homolog [Campylobacter jejuni]
           GI:6650363; contains Pfam profile PF00583:
           acetyltransferase, GNAT family
          Length = 288

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +1

Query: 397 VLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLM 504
           +   + ++G  NR+G+I +L V +S RR G+A  ++
Sbjct: 197 LFCSINQEGS-NRYGYIANLCVAKSARRQGIACNML 231


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,519,838
Number of Sequences: 28952
Number of extensions: 300071
Number of successful extensions: 648
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)