Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00525
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      26   0.30 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   6.4  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 567 CA*TVPCEGKKYWTLQRICLC 629
           CA  +   G K W ++R C+C
Sbjct: 69  CASYIQVSGSKIWQMERSCMC 89


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 428 PPSSAGRIPGRDQPPVSREDVTAIRISTLAILQLKLILMT 547
           P SS    PG+  P +SR  +  ++  T+A++ + +   T
Sbjct: 240 PRSSQKSAPGKRTPLISRAKINTVK-QTIAVIVMYIACST 278


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 85  LKNVLFQRVLPNVKLGANLEIQPAT 159
           L+N+  +RVLP V+ G    + PAT
Sbjct: 21  LENIRDRRVLPTVEPGYLRPLIPAT 45


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 117 KRKTWSKFGDSASDKPGPNPATTNVAED 200
           KRKTW    DS S     +P   + + D
Sbjct: 105 KRKTWKVEEDSPSPTSSVSPEVKDSSRD 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,863
Number of Sequences: 336
Number of extensions: 3447
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)