Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00523
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.3  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 497 YKGHFYFYLFNILSSFY 547
           +  +FYF +F +  SFY
Sbjct: 293 FLNNFYFIIFQVFESFY 309


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 505 TLVWSFWASLRQYGL 461
           TL W FW+ LR Y L
Sbjct: 567 TLGWFFWSLLRIYEL 581


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 109 IGYTFENYTQNNFVILTSYKGTYPYYVTYFFSFF 8
           I Y F+   +N++V L      + Y++ Y F+ +
Sbjct: 125 INYNFKESERNDYVSLLQLVFVFCYFI-YLFTVY 157


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 507 IFISTYLTSCLHFMIAENNQ 566
           I I   LTS  +FMI  N+Q
Sbjct: 503 IIIPVILTSVCYFMIGLNSQ 522


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 375 VCRLMIIASHYNNKWFKL 322
           VCRL  +  +YN + F L
Sbjct: 17  VCRLFALVPYYNFEKFSL 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,225
Number of Sequences: 336
Number of extensions: 2931
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)