Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00522
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 155 7e-37
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 137 2e-31
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 126 5e-28
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 113 5e-24
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 111 1e-23
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 110 2e-23
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 100 3e-20
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 93 5e-18
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 89 8e-17
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 87 5e-16
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 83 6e-15
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 80 4e-14
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 70 6e-11
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 69 1e-10
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 65 1e-09
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 60 3e-08
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 56 1e-06
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 54 4e-06
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 52 2e-05
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 3e-04
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 47 4e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 45 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 43 0.006
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 40 0.039
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 39 0.090
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 39 0.090
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.27
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 38 0.27
UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2; ... 36 0.84
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q6AJI5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, L... 35 1.9
UniRef50_A0WCW6 Cluster: Putative uncharacterized protein precur... 34 2.6
UniRef50_A7P6I7 Cluster: Chromosome chr9 scaffold_7, whole genom... 34 3.4
UniRef50_A3XH86 Cluster: Peptidase, M20/M25/M40 family protein; ... 33 4.5
UniRef50_A7RGT3 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.5
UniRef50_Q6C857 Cluster: Similarities with sp|P43583 Saccharomyc... 33 4.5
UniRef50_Q9KBB5 Cluster: Sensor protein; n=1; Bacillus haloduran... 33 5.9
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.9
UniRef50_A0UTZ4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 7.8
UniRef50_A7BZT3 Cluster: Two-component response regulator; n=1; ... 33 7.8
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 155 bits (377), Expect = 7e-37
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
RVRKNTEARRKGRHCG
Sbjct: 61 YRVRKNTEARRKGRHCG 77
Score = 128 bits (308), Expect = 1e-28
Identities = 63/96 (65%), Positives = 68/96 (70%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG GKR+GTANARMP K LW +KKIDRHLYH LYMK KGNV
Sbjct: 72 KGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNV 131
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*R 521
FKNKRVLMEYIH+KKAEK R+KML+DQAEARR K R
Sbjct: 132 FKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVR 167
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 137 bits (332), Expect = 2e-31
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 202 ARVRKNTEARRKGRHCGL 255
AR RKNT ARRKGRH G+
Sbjct: 61 ARCRKNTLARRKGRHMGI 78
Score = 122 bits (295), Expect = 6e-27
Identities = 56/94 (59%), Positives = 69/94 (73%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG + +GKR+GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK 515
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR K
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 126 bits (304), Expect = 5e-28
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +1
Query: 46 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 225
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 226 ARRKGRHCGL 255
ARRKGRH G+
Sbjct: 61 ARRKGRHMGI 70
Score = 117 bits (282), Expect = 2e-25
Identities = 53/90 (58%), Positives = 66/90 (73%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG + +GKR+GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEA 503
FKNKR+LME+IH+ KA+KAR K+L+DQAEA
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQAEA 153
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 113 bits (271), Expect = 5e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
+R RKN ARRKGRH G
Sbjct: 61 SRCRKNLIARRKGRHTG 77
Score = 109 bits (262), Expect = 6e-23
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG GKR+GTA+ARMPQK LW A KID+HLYH LY + KGN
Sbjct: 72 KGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQ 131
Query: 414 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*RRHASAARNVLPPRRR 566
FKNKRVL+++IH+KKAE+ R K LSDQAEA R + R ++ L R++
Sbjct: 132 FKNKRVLIDHIHKKKAERLRAKQLSDQAEAMRQRKRESRVNRQHRLEERKK 182
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 111 bits (267), Expect = 1e-23
Identities = 53/87 (60%), Positives = 60/87 (68%)
Frame = +3
Query: 255 GKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVL 434
GKRRGT AR+P K LW AKKID+H+YHS+Y+K KGNVFKNKRVL
Sbjct: 99 GKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVL 158
Query: 435 MEYIHRKKAEKARTKMLSDQAEARRIK 515
ME IH+ KAEKAR K L+DQ EARR K
Sbjct: 159 MEAIHKSKAEKAREKSLADQFEARRAK 185
Score = 58.4 bits (135), Expect = 1e-07
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 186
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 187 ---------------AVHSRARVRKNTEARRKGRHCGL-----VREEVLPMRVCHRRNY 303
+HSRAR + A+R GRH G RE LP +V R +
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRH 119
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 110 bits (265), Expect = 2e-23
Identities = 51/82 (62%), Positives = 64/82 (78%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 202 ARVRKNTEARRKGRHCGLVREE 267
AR RK EA+ GRH G+ R E
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRRE 102
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = +3
Query: 252 LGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 431
+G+R G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR
Sbjct: 98 VGRREGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRN 157
Query: 432 LMEYIHRKKAEKARTKMLSDQAEARRIK*RRHASAAR 542
L+E+IH+ K EK + + L++Q A+ ++ ++ + AR
Sbjct: 158 LVEHIHKIKNEKKKERQLAEQLAAKHLRDEQNRNKAR 194
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 100 bits (239), Expect = 3e-20
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 202 ARVRKNTEARRKGRH 246
A KNT KGRH
Sbjct: 61 AHCEKNT---LKGRH 72
Score = 85.8 bits (203), Expect = 8e-16
Identities = 44/123 (35%), Positives = 67/123 (54%)
Frame = +3
Query: 222 RGT*KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 401
+ T KG + +GK +GTAN +P++ W +KKID H+ HSLY++
Sbjct: 65 KNTLKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRV 124
Query: 402 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*RRHASAARNVLPPRRRNCCRP 581
K NVFKN+ +LME IH+ KA+KA K+L+DQ + + K + +P R+ P
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQGDVQSSKSKDAQKLREEQVPTRQHKFQFP 184
Query: 582 SLE 590
L+
Sbjct: 185 FLK 187
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 93.1 bits (221), Expect = 5e-18
Identities = 47/106 (44%), Positives = 63/106 (59%)
Frame = +3
Query: 198 PRPCPQKHRGT*KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 377
P +KH G +G + + GTANARM +K W +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 378 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK 515
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ EARR K
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQTEARRSK 620
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 89.0 bits (211), Expect = 8e-17
Identities = 38/78 (48%), Positives = 55/78 (70%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 202 ARVRKNTEARRKGRHCGL 255
R+R E + GRH GL
Sbjct: 61 NRIRSRKEEIKLGRHEGL 78
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/88 (40%), Positives = 53/88 (60%)
Frame = +3
Query: 252 LGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 431
LGKR+G+ N+R K +W + K++RHLY SLY+K+KGNVFKNK++
Sbjct: 78 LGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKI 137
Query: 432 LMEYIHRKKAEKARTKMLSDQAEARRIK 515
L E+IH+ K E+ R + D+ + R K
Sbjct: 138 LTEFIHKAKNEQKRKEEFLDKFKLMREK 165
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 86.6 bits (205), Expect = 5e-16
Identities = 33/77 (42%), Positives = 59/77 (76%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
R R E ++KGRH G
Sbjct: 61 YRARIRHEQKKKGRHRG 77
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/86 (34%), Positives = 38/86 (44%)
Frame = +3
Query: 216 KHRGT*KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 395
+H KG G R+G ARM +KELW KKIDR Y LY+
Sbjct: 66 RHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYI 125
Query: 396 KAKGNVFKNKRVLMEYIHRKKAEKAR 473
+AKG FK+K L ++ K R
Sbjct: 126 RAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/87 (48%), Positives = 51/87 (58%)
Frame = +3
Query: 255 GKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVL 434
GKRRGT ARMP K LW +KIDRHLY +LY KAKGN+FKNKRVL
Sbjct: 79 GKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVL 138
Query: 435 MEYIHRKKAEKARTKMLSDQAEARRIK 515
+E+I + E+ K ++ E RR K
Sbjct: 139 LEHIVGMQKEQELEKKKKEELEQRRKK 165
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
R+R A+R GRH G
Sbjct: 61 GRIRARHAAKRLGRHSG 77
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
R RK EA++KGRH G
Sbjct: 61 GRCRKRLEAKKKGRHMG 77
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/105 (32%), Positives = 57/105 (54%)
Frame = +3
Query: 207 CPQKHRGT*KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 386
C ++ KG + GKR GTANARMPQK++W +I + +
Sbjct: 63 CRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRV 122
Query: 387 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*R 521
Y +AKG++FK++ + + I ++KA++ R K L++QA+A + R
Sbjct: 123 FYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQAKALNLSNR 167
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +1
Query: 46 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 216
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/74 (39%), Positives = 51/74 (68%)
Frame = +1
Query: 31 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 210
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 211 RKNTEARRKGRHCG 252
+K E R+KGR G
Sbjct: 66 KKLKEQRKKGRRRG 79
Score = 49.2 bits (112), Expect = 8e-05
Identities = 27/78 (34%), Positives = 34/78 (43%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG G RRG A AR P KE W + KIDR +Y LY AKG
Sbjct: 74 KGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGA 133
Query: 414 FKNKRVLMEYIHRKKAEK 467
F+++ L Y+ + K
Sbjct: 134 FRSRSHLFLYMREHELLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = +1
Query: 40 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 219
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 220 TEARRKGRHCG 252
E ++KGR G
Sbjct: 66 HEKKKKGRRRG 76
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/79 (31%), Positives = 32/79 (40%)
Frame = +3
Query: 219 HRGT*KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 398
H KG G R+G AR K W K ID Y LY K
Sbjct: 66 HEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKK 125
Query: 399 AKGNVFKNKRVLMEYIHRK 455
KGN+FK++ L+ Y+ +K
Sbjct: 126 VKGNLFKSRSHLLLYLKQK 144
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +3
Query: 363 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQAEARRIK 515
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQAEARR K
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQAEARRCK 160
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = +1
Query: 34 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 213
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 214 KNTEARRKGRHCGL 255
T ARR+G H G+
Sbjct: 90 --TLARRRGWHMGI 101
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 202 ARVRKNTEARRKGRHCG 252
R R E R G G
Sbjct: 61 GRARSRAEKRAYGHRKG 77
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = +3
Query: 351 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK*RRHA 530
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ QAEARR K
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSKTEEAH 117
Query: 531 SAARNVLPPRRRNCCR--PSLEKTKPRLPLRSKHYVVNNK 644
L ++ K + +LPL + ++ +K
Sbjct: 118 KGCEERLQAKKEEIIETVQGGRKQEIKLPLFGREPIIEDK 157
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 202 ARVRKNTEARRKGRHCG 252
R R+ G G
Sbjct: 61 GRARERDAKESYGHKKG 77
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +1
Query: 43 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 222
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 223 EARRKGRHCG 252
E KGR G
Sbjct: 67 EQLAKGRRRG 76
Score = 34.3 bits (75), Expect = 2.6
Identities = 21/71 (29%), Positives = 26/71 (36%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG G RGT AR P+K W T KID+ Y Y K
Sbjct: 71 KGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGS 130
Query: 414 FKNKRVLMEYI 446
F ++ L +I
Sbjct: 131 FVSRAQLRNHI 141
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Frame = +1
Query: 40 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 201
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 202 ARVRKNTEARRKGRHCG 252
+R RK + KGR G
Sbjct: 66 SRARKAAAQKAKGRRSG 82
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 234 KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 413
KG G R+G+ANAR P+K W I Y Y KAKG
Sbjct: 77 KGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKELKGMREDDSISSSEYRYYYRKAKGGS 136
Query: 414 FKN 422
+++
Sbjct: 137 YRS 139
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = -2
Query: 515 LYSAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQE 336
L +A L L+ L LL L DVL E+ L+LEH+TL L +E ++ +P++L +V +
Sbjct: 66 LLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTVPAQ 125
Query: 335 QFS*NPLSLYP*FLLWHTRIGSTSSLT 255
Q + + L+L P L HT + T++LT
Sbjct: 126 QATEDTLALNPESLRRHTSLPGTAALT 152
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 28 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 207
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 208 VR-KNTEARRKGRHCG 252
+ K + ++G G
Sbjct: 64 AQHKRRQKAKRGSKAG 79
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 46.8 bits (106), Expect = 4e-04
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = +3
Query: 216 KHRGT*KGSSLWLGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 395
+H KG +G+R+G A AR+ KE W + IDR Y LYM
Sbjct: 67 RHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
Query: 396 KAKGNVFKNKRVLMEYI 446
AKG F++ L Y+
Sbjct: 127 LAKGGTFRDLASLKRYM 143
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 34 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 207
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 208 VRKNTEARRKGRHCGLVREE 267
+ RRKGR G+ R +
Sbjct: 64 SKVRHLQRRKGRRRGMGRRK 83
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 357 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 467
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 49 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 180
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +1
Query: 22 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 198
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 199 RARVRKNTEAR 231
R+++ + R
Sbjct: 60 GGRLKERRKKR 70
Score = 40.7 bits (91), Expect = 0.029
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 255 GKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 419
G R+G AR K++W K IDRH Y LY+K KG +K
Sbjct: 80 GSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1
Query: 183 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 67
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 43.2 bits (97), Expect = 0.006
Identities = 33/94 (35%), Positives = 43/94 (45%)
Frame = -2
Query: 470 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 291
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + + L
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRHRILILLIQVTFS 124
Query: 290 WHTRIGSTSSLTKPQ*RPFLRASVFLRTRAREWT 189
+ PF R+ VF R RAREWT
Sbjct: 125 GIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 40.3 bits (90), Expect = 0.039
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 43 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 222
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 223 EARRKGRHCG 252
++KGR G
Sbjct: 65 IKKKKGRRRG 74
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 39.1 bits (87), Expect = 0.090
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -1
Query: 219 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLI 109
VF+ G+D ++ LDD+ I D ++D+L GVG+ D I
Sbjct: 127 VFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFI 163
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 39.1 bits (87), Expect = 0.090
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = +1
Query: 28 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 207
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 208 VRKNTEARRKGRHCGLVREE 267
+ ++ G G+ R +
Sbjct: 62 KKLRKAKKQSGLKRGIGRRK 81
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 37.5 bits (83), Expect = 0.27
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 393 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRIK 515
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 37.5 bits (83), Expect = 0.27
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 28 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 207
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 208 VRKNTEARRK 237
+ R K
Sbjct: 64 AQTKKAQRNK 73
>UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 659
Score = 35.9 bits (79), Expect = 0.84
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -1
Query: 333 IFLEPFVFVPIVPSVAYAHWQYLF-SYQATVTTLSTCLCVFADTGAGVDCYRFLDDETIL 157
IF+EPF IV + W+ F ++ + ++T C+FAD + R DD+ +
Sbjct: 402 IFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFAD-ASPAKWTRLQDDDVAI 460
Query: 156 DHLTDVLSGVGVCDLIDFI 100
+ + SG + D+I F+
Sbjct: 461 EEEKEEYSG-SIEDIIKFL 478
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.5
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +1
Query: 40 QKRLAASVMRCGKKKVWLDPNEINEIAN 123
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q6AJI5 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 169
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 580 GLQQFLLLGGNTFLAALACLLYFIRRASAWSLSIF 476
G+++FLLLGG T AL+C F RR A +F
Sbjct: 75 GIREFLLLGGVTLALALSCWFCFYRRTIAGKALVF 109
>UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, LytS
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Signal transduction histidine kinase, LytS precursor -
Alkaliphilus metalliredigens QYMF
Length = 572
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = -3
Query: 613 SGKRGFVFSSEGLQQFLLLGGNTFLAALACLLY---FIRRASAWSLSIFVLAFSAFFLWM 443
+G +FS++G FL++ TFL ++ Y +R + ++ ++ F W+
Sbjct: 133 NGYFSIIFSTKGPMFFLMVASGTFLGIISIFFYLRGLLRTSGFHRQGYLIMIIASLFPWV 192
Query: 442 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLY 344
++LN + +F+ +++ +S+ +LY
Sbjct: 193 -----TVYLNAMNKSFLGIDYFPVVSVLSGILY 220
>UniRef50_A0WCW6 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter lovleyi SZ|Rep: Putative
uncharacterized protein precursor - Geobacter lovleyi SZ
Length = 322
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = -3
Query: 550 NTFLAALACLLYFIRRASAWSLSIFVLAFSAFF---LWMYSMSTRLFLNTLPFAFM*SEW 380
N L + LL F+R A+ ++L+I + F F L ++ + F P A + +
Sbjct: 190 NLGLISAVTLLLFMRTAAKYALAINLAPFREFRTPDLLVWLLIIAGFAMLAPVALINTPA 249
Query: 379 YRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAVPLLL 257
L++ L+VLYF L +C SSF + + +LL
Sbjct: 250 LNILTV-LSVLYFMQGLAVLLTICERSSFAATLKILLGVLL 289
>UniRef50_A7P6I7 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=4; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 498
Score = 33.9 bits (74), Expect = 3.4
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = -3
Query: 541 LAALACLLYFIRRASAWSLSI---FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRC 371
++ LA +FI R ++ I ++L F A FL +Y++ +L L+ ++ S+
Sbjct: 276 ISTLAAFCFFIDRHEFSNIDINITYLLLFGAIFLEVYAL-IKLILSDWSIVWLSSKKNPL 334
Query: 370 L-SIFLAVLYFRSNFLRTLCLCTHSSFCG 287
SI+ A+ +FRS ++ LC +S CG
Sbjct: 335 ADSIYRAITFFRSVWVEMLCYA--ASHCG 361
>UniRef50_A3XH86 Cluster: Peptidase, M20/M25/M40 family protein;
n=1; Leeuwenhoekiella blandensis MED217|Rep: Peptidase,
M20/M25/M40 family protein - Leeuwenhoekiella blandensis
MED217
Length = 768
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = -3
Query: 622 LLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIRRASAWSLSIFVLAFSAFFLW- 446
L L K+ + + LL G F+A L++FI + S L+F+ F W
Sbjct: 385 LTLDPKQADILQGFPYNGYELLAG--FVALTLALVFFIYKLFYRPDSAAALSFAPLFFWL 442
Query: 445 MYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF 293
M + +L F ++ ++ LS++L + Y + F LC + F
Sbjct: 443 MIATGVAFYLPGASF-YIIPVYFGLLSVYLLIKYSKPQFFILTLLCAPALF 492
>UniRef50_A7RGT3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 456
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = -3
Query: 565 LLLGGNTFLAALACLLYFIRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLP-FAFM* 389
+L GG LA + + + + W L + ++ F W S+ T FL T+P +
Sbjct: 328 ILTGGGPSLAGILAV-HLVHHLEIWGLRPKLSKYT--FCWTLSVLTLAFLGTIPHLSNHA 384
Query: 388 SEWYRCLSIFLAVLYFRSNFLRTLCL 311
+ W + LA++Y +++ +CL
Sbjct: 385 NVWGFVVGFLLAMIYIPFQWVKRICL 410
>UniRef50_Q6C857 Cluster: Similarities with sp|P43583 Saccharomyces
cerevisiae YFL007w BLM3; n=1; Yarrowia lipolytica|Rep:
Similarities with sp|P43583 Saccharomyces cerevisiae
YFL007w BLM3 - Yarrowia lipolytica (Candida lipolytica)
Length = 2031
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 348 CTSGAIFLEPFVFVPIVPSVAYAHWQYLFSYQATVTTLSTCLCV 217
C G FLEP V +P AY Q L T+TTL T + +
Sbjct: 482 CLQGLAFLEPHVIIPQFLKEAYPSLQGLVETHRTLTTLQTLVAL 525
>UniRef50_Q9KBB5 Cluster: Sensor protein; n=1; Bacillus
halodurans|Rep: Sensor protein - Bacillus halodurans
Length = 914
Score = 33.1 bits (72), Expect = 5.9
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Frame = -3
Query: 529 ACLLYFIRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEW--------YR 374
AC+L+FIR L V + F + S RL L +P + EW Y
Sbjct: 103 ACILFFIRPKKIELLYFMVAVLLSAFSVLVS-DERLLLQWVPLNY---EWFIKLAYLSYT 158
Query: 373 CLSIF--LAVLYFRSNFLRTLCLCTHSSFCGIRALAVPLLLPSHSDDPFYVPLCF 215
LS+F L V Y SN+ R + S FC + AL + L+ P+ + + + L F
Sbjct: 159 GLSLFFLLFVRYLFSNYKRNQSVRWISGFCALYALFI-LIAPATTIREWTIMLLF 212
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 191 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 72
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_A0UTZ4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 505
Score = 33.1 bits (72), Expect = 5.9
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 414 THYPSPSCRVSGIDACQSSWQFCTSGA---IFLEPFVFVPIVPSVAYAHWQYLFSYQATV 244
T+ P V G C + TSG I L V Y+ WQY +SY T
Sbjct: 66 TYGPGACSPVPGSQTCIDTTPCKTSGTGQQICLSTATPPAGALQVPYSCWQYSYSYACTG 125
Query: 243 TTLSTCLCVFADTGAGV 193
TT+ TC +++ GV
Sbjct: 126 TTVDTCGQYRSNSACGV 142
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1
Query: 219 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 100
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
>UniRef50_A7BZT3 Cluster: Two-component response regulator; n=1;
Beggiatoa sp. PS|Rep: Two-component response regulator -
Beggiatoa sp. PS
Length = 301
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = -2
Query: 533 ACVPPLLYSAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITL 402
AC+ PL + G +++A LR ++S ++ H H+++ +HIT+
Sbjct: 220 ACLLPLTNAKGATVMANKLRESIIS---ENIPHAHSIIADHITI 260
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,797,169
Number of Sequences: 1657284
Number of extensions: 13825197
Number of successful extensions: 41202
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 39574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41156
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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