Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00521
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 136 8e-33
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 136 8e-33
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 136 8e-33
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 136 8e-33
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 136 8e-33
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 2e-16
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 80 1e-15
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 80 1e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 5e-14
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 44 6e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 2e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 37 0.012
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 34 0.061
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.11
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.11
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.14
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 31 0.43
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 31 0.57
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.3
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.3
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.1
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 4.0
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 7.0
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 27 9.3
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 134 bits (324), Expect = 4e-32
Identities = 66/70 (94%), Positives = 67/70 (95%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 93.5 bits (222), Expect = 9e-20
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 152
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 745 IQKESTLHLV 754
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 821 IQKESTLHLV 830
Score = 134 bits (324), Expect = 4e-32
Identities = 66/70 (94%), Positives = 67/70 (95%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 745 IQKESTLHLV 754
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 192 IQKESTLHLV 221
IQK+STLHLV
Sbjct: 821 IQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 136 bits (330), Expect = 8e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 192 IQKESTLHLV 221
+ S LHLV
Sbjct: 61 VLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +3
Query: 9 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DY 188
K+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 189 NIQKESTLHLV 221
NI+ E +HLV
Sbjct: 220 NIRDEDIIHLV 230
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 33 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTL 212
+TG IT VE SD I+++ K+ + + P ++ +D RT+ DYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 213 HL 218
L
Sbjct: 152 RL 153
Score = 33.9 bits (74), Expect = 0.081
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 119
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLXRECTGDXYGAGVFMAVMEDRHY 430
++K Y+TP LAVL++YK+DENGKI RL +EC G GVFMA +RHY
Sbjct: 75 KKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHY 134
Query: 431 CGKCHSTMV 457
CG+CH T+V
Sbjct: 135 CGRCHDTLV 143
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQ 197
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 198 KESTLHL 218
E+T+++
Sbjct: 57 SEATIYV 63
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLXRECTGDXYGAGVFMAVMEDRHY 430
++K Y+TP LAVL++YK+DENGKI RL +EC G GVFMA +RHY
Sbjct: 75 KKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHY 134
Query: 431 CGKCHSTMV 457
CG+CH T+V
Sbjct: 135 CGRCHDTLV 143
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQ 197
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 198 KESTLHL 218
E+T+++
Sbjct: 57 SEATIYV 63
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 5e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 122
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = +3
Query: 9 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DY 188
+ QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 189 NIQKESTL 212
NIQK ST+
Sbjct: 212 NIQKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTL* 182
++I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 183 DYNIQKESTLHL 218
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 119
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 9 KMQIFVKTLTGKTITLEV 62
++ +FVKT TGKTIT+ +
Sbjct: 180 EIDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +3
Query: 9 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DY 188
K Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +Y
Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96
Query: 189 NIQKESTLHL 218
NI ST+ L
Sbjct: 97 NISNNSTMDL 106
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 155
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +3
Query: 36 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTLH 215
+G L V SDTI VK I + + R++ K LED TL YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 216 L 218
L
Sbjct: 241 L 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 54 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTLHL 218
L V SDTI ++K +I + + R++ GK LED +L YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 54 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTL 212
L V SDTI +K +I GI R K LED TL YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLED 167
+ + +TLT LE+ TI VKA + ++G P Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 34.3 bits (75), Expect = 0.061
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 42 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTL*DYNIQKESTL 212
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T+ D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +3
Query: 33 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTL 212
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 213 HL 218
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +3
Query: 33 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTL 212
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 213 HL 218
+L
Sbjct: 644 YL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 30 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DY 188
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 33 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTL 212
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 31.1 bits (67), Expect = 0.57
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 192 IQKESTLHLV 221
I T+HLV
Sbjct: 81 ISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 31.1 bits (67), Expect = 0.57
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 192 IQKESTLHLV 221
I T+HLV
Sbjct: 81 ISDGQTVHLV 90
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 225 STPGGGWIPSGYCSPRGYVHLPAAFQQ 145
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 122
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
+Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 119
M + +KT TGKTIT+E S VK +++ K+G+
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 42 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRL 140
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 121 LPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRNAREELLH-TQEDQAQEE 297
L INR + ++K ++P+R+ SRR + + L N++E + H T E Q E
Sbjct: 732 LEINRNLTNWGMTYKQEMPARSIPSRRTWQNETFIKNELDLVNSKESVPHITDETTTQPE 791
Query: 298 EGQTSRPQVL 327
E P ++
Sbjct: 792 EAARRFPDLM 801
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,431,356
Number of Sequences: 27780
Number of extensions: 257855
Number of successful extensions: 776
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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