Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00521
(563 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 135 2e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 135 2e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 135 2e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 135 2e-32
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 135 2e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 135 2e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 135 2e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 135 2e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 135 2e-32
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 135 2e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 134 4e-32
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 134 5e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 128 3e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 109 2e-24
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 83 9e-17
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 66 1e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 62 3e-10
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 59 2e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 2e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 4e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 1e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 48 4e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 48 4e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 48 6e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 48 6e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 48 6e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 48 6e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 47 1e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 2e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 45 3e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 44 7e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 44 7e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 43 2e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 43 2e-04
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 42 2e-04
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 42 2e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 42 3e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 42 4e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 41 5e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 40 0.002
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 39 0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 39 0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.003
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 38 0.005
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 38 0.006
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.008
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.008
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.043
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.057
At1g11970.1 68414.m01383 hypothetical protein 33 0.100
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.17
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 30 0.93
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 30 1.2
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 29 2.8
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 28 5.0
At5g12280.1 68418.m01444 hypothetical protein 27 6.5
At4g11910.1 68417.m01894 expressed protein hypothetical protein ... 27 6.5
At3g59180.1 68416.m06598 hypothetical protein contains a novel d... 27 6.5
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 27 6.5
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 27 6.5
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 27 8.7
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 8.7
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 73.7 bits (173), Expect = 8e-14
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLXRECTGDXYGAGVFMAVMEDRHY 430
++K Y+ P LAVL+FYK+D +GK+ RL +EC GAG FMA DRHY
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHY 140
Query: 431 CGKCHSTMVFKDD 469
CGKC T V++ +
Sbjct: 141 CGKCGLTYVYQKE 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 74.1 bits (174), Expect = 6e-14
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLXRECTGDXYGAGVFMAVMEDRHY 430
++K Y+ P LAVL+FYKVD +GK+ RL +EC GAG FMA DRHY
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHY 140
Query: 431 CGKCHSTMVFKDD 469
CGKC T V++ +
Sbjct: 141 CGKCGLTYVYQKE 153
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 90.2 bits (214), Expect = 8e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQ 197
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 198 KESTLHLV 221
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 132 bits (319), Expect = 2e-31
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 212 IQKESTLHLV 221
Score = 128 bits (309), Expect = 3e-30
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 136 IQKESTLHLV 145
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 170
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQ 197
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 198 KESTLHLV 221
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 77.0 bits (181), Expect = 8e-15
Identities = 36/75 (48%), Positives = 45/75 (60%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLXRECTGDXYGAGVFMAVMEDRHY 430
++K Y+ P LAVL+FYKVD +GK+ RL +EC G G FMA DRHY
Sbjct: 81 KKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHY 140
Query: 431 CGKCHSTMVFKDDDK 475
CGKC +T VFK D+
Sbjct: 141 CGKCGTTYVFKKADE 155
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 134 bits (324), Expect = 4e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 120 bits (288), Expect = 9e-28
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLHLV 221
+Q++STLHL+
Sbjct: 61 VQEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 134 bits (323), Expect = 5e-32
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 127 bits (306), Expect = 6e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 215 IQKESTLHLV 224
Score = 118 bits (284), Expect = 3e-27
Identities = 61/71 (85%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTL*DY 188
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 189 NIQKESTLHLV 221
NIQKESTLHLV
Sbjct: 291 NIQKESTLHLV 301
Score = 103 bits (246), Expect = 1e-22
Identities = 51/71 (71%), Positives = 59/71 (83%)
Frame = +3
Query: 6 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*D 185
+ MQI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL D
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 186 YNIQKESTLHL 218
Y+IQK+S LHL
Sbjct: 61 YSIQKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 128 bits (308), Expect = 3e-30
Identities = 63/70 (90%), Positives = 66/70 (94%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 115 bits (277), Expect = 2e-26
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 192 IQKESTLHLV 221
IQKESTLHLV
Sbjct: 63 IQKESTLHLV 72
Score = 105 bits (251), Expect = 3e-23
Identities = 56/75 (74%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRT 176
R MQIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 177 L*DYNIQKESTLHLV 221
L DY+IQKESTLHLV
Sbjct: 376 LADYSIQKESTLHLV 390
Score = 105 bits (251), Expect = 3e-23
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 192 IQKESTLHLV 221
I K+STL+LV
Sbjct: 612 IHKKSTLYLV 621
Score = 100 bits (239), Expect = 8e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
MQIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 192 IQKESTLHL 218
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 90.6 bits (215), Expect = 6e-19
Identities = 51/78 (65%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Frame = +3
Query: 3 RVKMQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
R M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294
Query: 168 GRTL*DYNIQKESTLHLV 221
GRTL YNIQK STL+LV
Sbjct: 295 GRTLAHYNIQKGSTLYLV 312
Score = 87.8 bits (208), Expect = 4e-18
Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Frame = +3
Query: 12 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 170
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 171 RTL*DYNIQKESTLH 215
RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
Score = 87.0 bits (206), Expect = 8e-18
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 7/76 (9%)
Frame = +3
Query: 12 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDG 170
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 171 RTL*DYNIQKESTLHL 218
RTL DY I+ STL L
Sbjct: 215 RTLADYGIRNRSTLCL 230
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 109 bits (261), Expect = 2e-24
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 192 IQKESTLHLV 221
IQ +S LHL+
Sbjct: 146 IQNDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 83.4 bits (197), Expect = 9e-17
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 192 IQKESTLHLV 221
+++ S LHLV
Sbjct: 61 LERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 155
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 61.3 bits (142), Expect = 4e-10
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 6 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*D 185
V M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+ D
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 186 YNIQKESTL 212
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVK 92
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D L +Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 192 IQKESTLHLV 221
++ TLHL+
Sbjct: 84 LENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/72 (40%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 KMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*D 185
++QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 186 YNIQKESTLHLV 221
Y+I+++++L LV
Sbjct: 154 YSIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTL*D 185
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 186 YNIQKES 206
N+ + S
Sbjct: 61 NNVVENS 67
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +3
Query: 6 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*D 185
V + + V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 186 YNIQKESTLHLV 221
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKE 203
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 204 STLHLV 221
T+H+V
Sbjct: 82 HTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M +++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 192 IQKESTLHL 218
I ES L L
Sbjct: 61 ILFESRLLL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTL* 182
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 183 DYNIQKES 206
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTL* 182
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 183 DYNIQKES 206
+ + + S
Sbjct: 61 ENKVAENS 68
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTL* 182
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 DYNIQKESTL 212
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTL* 182
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 DYNIQKESTL 212
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTL* 182
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 DYNIQKESTL 212
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTL* 182
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 183 DYNIQKESTL 212
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M + + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 192 IQKESTL 212
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M++ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 192 IQKESTLHL 218
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + L
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 192 IQKESTLHLV 221
++ + L ++
Sbjct: 61 VKDDDLLMMM 70
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL*DY 188
++I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + L DY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 189 NIQKESTLHLV 221
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL 179
R M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 180 *DYNIQKESTLHLV 221
N+Q S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
M +F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DY 188
+Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI--- 65
Query: 189 NIQKESTLHLV 221
Q ++T++LV
Sbjct: 66 -SQPDATVNLV 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTL*DYNIQ 197
VKT GK VE I VK +I K G + P++Q +++ G++LED + D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 198 KESTLHLV 221
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTL*DYNIQ 197
VKT GK VE I VK +I K G + P++Q +++ G++LED + D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 198 KESTLHLV 221
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTL* 182
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 183 DYNIQKESTLHL 218
DY I+ H+
Sbjct: 61 DYKIKACDIFHM 72
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL*DY 188
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L +
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 189 NIQKESTLHLV 221
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 39 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNIQKESTLHL 218
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 219 V 221
+
Sbjct: 604 M 604
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTL* 182
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 183 DYNIQKESTLHLV 221
+ +S + ++
Sbjct: 61 ANKVFDKSVIAII 73
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
+++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 192 IQKESTLHL 218
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 125
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVK 92
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
M +F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYN 191
+ + ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 192 IQKESTLHL 218
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DY 188
+Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAI--- 65
Query: 189 NIQKESTLHLV 221
Q ++T++LV
Sbjct: 66 -SQSDTTMNLV 75
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTL*DY 188
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R + D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 189 NIQKESTLHLV 221
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 152
M+ V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 152
M+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 54 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.3 bits (75), Expect = 0.057
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 9 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 176
+ ++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 33.5 bits (73), Expect = 0.100
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 3 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 122
R + ++ + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 30.3 bits (65), Expect = 0.93
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 54 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTL*DYN 191
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 192 IQKESTLHLV 221
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Frame = +3
Query: 69 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTL 179
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTL 71
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 69 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNI 194
S+ + ++K KI + IP N+Q+L L+D +L YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 42 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL*DYNI 194
K + + V+ S+ + ++K KI + P N+Q+L L+D +L YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At4g11910.1 68417.m01894 expressed protein hypothetical protein
F7H19.100 -Arabidopsis thaliana,PID:e1310060
Length = 466
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 445 QHDGLQRRRQINKSPLACKERCDCC 519
QHDG ++ L C + C CC
Sbjct: 209 QHDGRTHKKSETLPELPCPDECKCC 233
>At3g59180.1 68416.m06598 hypothetical protein contains a novel
domain with similarity to F-box domain;
Length = 475
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 457 LQRRRQINKSPLACKERCD--CCV*WILN 537
LQ +N+ L CK RCD C WI+N
Sbjct: 48 LQGNAPLNRFSLKCKVRCDSACVDGWIIN 76
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 493 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAVLIAC 374
L+ TY + + DH A+TLP L + A+ +AC
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLAC 131
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 493 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAVLIAC 374
L+ TY + + DH A+TLP L + A+ +AC
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLAC 131
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 221 HQVEGGF--LLDIVVLEGTSIFQLLSSKDQPLLIGRDSLFVL 102
H V+G LLD V GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 109 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 213
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,927,201
Number of Sequences: 28952
Number of extensions: 242633
Number of successful extensions: 779
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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