Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00519
(491 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 115 7e-25
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 111 8e-24
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 107 2e-22
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 104 9e-22
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 103 3e-21
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 97 1e-19
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 94 1e-18
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 93 4e-18
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 92 5e-18
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 92 7e-18
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 89 7e-17
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 85 8e-16
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 85 1e-15
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 84 1e-15
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 79 5e-14
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 79 5e-14
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 79 5e-14
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 78 1e-13
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 77 2e-13
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 76 4e-13
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 75 7e-13
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 72 8e-12
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 71 2e-11
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 70 2e-11
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 66 5e-10
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 62 5e-09
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 62 9e-09
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 60 3e-08
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 58 1e-07
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 55 1e-06
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 52 5e-06
UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n... 33 2.6
UniRef50_Q57WH2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 115 bits (276), Expect = 7e-25
Identities = 53/93 (56%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+
Sbjct: 7 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 66
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS-LSAGHQAV 277
R GV ++TKI+GGR+RNGV PS S G ++V
Sbjct: 67 RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 62.9 bits (146), Expect = 4e-09
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
F R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 92 FSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 111 bits (267), Expect = 8e-24
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+
Sbjct: 10 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYL 69
Query: 182 RSPVGVKTVTKIFGGRKRNGVTP 250
R +GV KI+GGR+RNG P
Sbjct: 70 RQGIGVGGFQKIYGGRQRNGSRP 92
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
FC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 95 FCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 107 bits (256), Expect = 2e-22
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAILRH+YI
Sbjct: 7 KDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAILRHLYI 66
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS-LSAGHQAVL 280
R P G+ + K F +KRNGV PS S H +V+
Sbjct: 67 R-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVI 99
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +1
Query: 271 GSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 96 GSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 104 bits (250), Expect = 9e-22
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI RHIY+
Sbjct: 7 KDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYL 66
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
R VGV + K++GG G+ PS
Sbjct: 67 RKQVGVGRLCKVYGGSVNRGMRPS 90
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +1
Query: 268 SGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLDRI
Sbjct: 96 SGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 103 bits (246), Expect = 3e-21
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = +2
Query: 8 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 187
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 188 PVGVKTVTKIFGGRKRNGVTPS 253
P GV + +++G KR GVTP+
Sbjct: 70 PTGVGALRRVYGSNKRRGVTPN 91
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 354
F ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 93 FAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 97.5 bits (232), Expect = 1e-19
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +YI
Sbjct: 14 KDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKLYI 73
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPSLSA 262
R +G KI+G RKR G+ P S+
Sbjct: 74 RGGIGTGEFRKIYGDRKRRGMKPCRSS 100
Score = 39.1 bits (87), Expect = 0.053
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +1
Query: 262 RSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 378
+SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 101 KSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 94.3 bits (224), Expect = 1e-18
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I R +Y+
Sbjct: 16 RDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASIARKVYL 75
Query: 182 RSPVGVKTVTKIFGGRKRNGV 244
R GV ++ K++GG R GV
Sbjct: 76 RQYTGVGSLKKVYGGAARKGV 96
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 384
F ++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 101 FQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 92.7 bits (220), Expect = 4e-18
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R +YI
Sbjct: 9 KDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYI 68
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
R GV T ++FGG +RNGV P+
Sbjct: 69 RGGDGVATYRRVFGGNRRNGVRPN 92
Score = 37.5 bits (83), Expect = 0.16
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQGRRDLDRI 384
F +G R L+ L+ LK++E GGR +T GRRDLDRI
Sbjct: 94 FADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRI 137
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 92.3 bits (219), Expect = 5e-18
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LRH+Y
Sbjct: 29 KDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLRHLYF 88
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
GV + K++ +KRNG P+
Sbjct: 89 HPDSGVDRLRKVYSSKKRNGSAPN 112
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 91.9 bits (218), Expect = 7e-18
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 20/103 (19%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKELA 121
KDV + VK +AHLK++GK+ ++PE +D+VKTARFKEL
Sbjct: 10 KDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKELP 69
Query: 122 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 250
PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P
Sbjct: 70 PYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRP 112
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
FC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 115 FCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 88.6 bits (210), Expect = 7e-17
Identities = 41/87 (47%), Positives = 58/87 (66%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+Y+
Sbjct: 20 KDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHLYV 79
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPSLSA 262
R VGV ++K +G ++RNG + SA
Sbjct: 80 RPNVGVGALSKFYGRKQRNGTARNHSA 106
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 85.0 bits (201), Expect = 8e-16
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCAA+LR IY+
Sbjct: 32 KDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLRAIYL 91
Query: 182 RSPVGVKTVTKIFGGRKRNGVTP 250
R VG ++K FG +K G P
Sbjct: 92 RPGVGYGGLSKRFGNKKNYGSRP 114
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 84.6 bits (200), Expect = 1e-15
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y+
Sbjct: 8 KDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYL 67
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
+ +GV + + +G + PS
Sbjct: 68 NNGIGVMALRRAYGDQYNKHYYPS 91
Score = 39.5 bits (88), Expect = 0.040
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 268 SGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
SG + R LQ LE + +V K+Q G R LT +GR+D+D+I
Sbjct: 97 SGKVNRYILQQLEKMGIVGKIQSG-RSLTKEGRKDMDKI 134
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 84.2 bits (199), Expect = 1e-15
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +YI
Sbjct: 6 DVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYID 65
Query: 185 SPVGVKTVTKIFGGRKRNGVTP-SLSAGHQAVLHARL 292
PVGV ++ +GG+K G P G A++ L
Sbjct: 66 GPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRAL 102
Score = 40.3 bits (90), Expect = 0.023
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 381
F R SG+I R+ALQ LE L+++ ++ GR++T +GR LD+
Sbjct: 90 FRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 79.0 bits (186), Expect = 5e-14
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +2
Query: 20 KIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV 199
K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR AA+ RHIY+R VGV
Sbjct: 87 KFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGV 146
Query: 200 KTVTKIFGGRKRNGVTPS 253
+ K+ G K G P+
Sbjct: 147 GRLRKVHGSTKNRGSRPN 164
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +1
Query: 265 SSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 384
+SGS+ RK +QSLE + ++E ++ GGR +T G+RDLDRI
Sbjct: 169 ASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 79.0 bits (186), Expect = 5e-14
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +Y+
Sbjct: 6 DVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRVYVD 65
Query: 185 SPVGVKTVTKIFGGRKRNGVTP-SLSAGHQAVLHARL 292
P+GV+ + +GG K G P + G +VL L
Sbjct: 66 GPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKAL 102
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 79.0 bits (186), Expect = 5e-14
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +YI
Sbjct: 6 DVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYID 65
Query: 185 SPVGVKTVTKIFGGRKRNGVTP 250
PVG++ + +GGRK G P
Sbjct: 66 GPVGIERLRTYYGGRKNRGHAP 87
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
F ++ GSI RKALQ LEA +EKV GR++T +GR LD+I
Sbjct: 90 FYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 77.8 bits (183), Expect = 1e-13
Identities = 36/80 (45%), Positives = 47/80 (58%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R IY+
Sbjct: 59 KDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKIYV 118
Query: 182 RSPVGVKTVTKIFGGRKRNG 241
R GV +T +FG NG
Sbjct: 119 RGHWGVGNLTHMFGSVNDNG 138
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/101 (38%), Positives = 56/101 (55%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +Y+
Sbjct: 11 KDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKVYL 70
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPSLSAGHQAVLHARLCNRW 304
+ G+ T+ IFG K G +L HQA H ++ RW
Sbjct: 71 KPHTGISTLKHIFGSNKDRG---NLRNKHQA-CHGKIL-RW 106
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 76.2 bits (179), Expect = 4e-13
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +2
Query: 8 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 187
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 188 PVGVKTVTKIFGGRKRNGVTP 250
PVGV + +GGR+ G P
Sbjct: 67 PVGVSRLRTYYGGRQDRGARP 87
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 75.4 bits (177), Expect = 7e-13
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILRH+Y
Sbjct: 30 DCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILRHLYFH 89
Query: 185 SPVGVKTVTKIFGGRKRNGVTPS 253
G+ + +++ RKR G P+
Sbjct: 90 PDEGIGRLRRVYASRKRRGCAPN 112
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 71.7 bits (168), Expect = 8e-12
Identities = 36/82 (43%), Positives = 47/82 (57%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +YI
Sbjct: 6 DVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYID 63
Query: 185 SPVGVKTVTKIFGGRKRNGVTP 250
PVG++ + +GGRKR G P
Sbjct: 64 GPVGIERLRTFYGGRKRRGSKP 85
Score = 38.7 bits (86), Expect = 0.070
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
F + SG+I R AL LE L V+K ++G R++T GR LD++
Sbjct: 88 FRKGSGAIVRNALHQLEQLGFVKKTREG-RVVTPMGRSFLDKV 129
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 70.5 bits (165), Expect = 2e-11
Identities = 29/84 (34%), Positives = 52/84 (61%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +YI
Sbjct: 51 KDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLYI 110
Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
+GV + + F ++R GV P+
Sbjct: 111 HPDIGVGFLRRQFSYKQRRGVAPN 134
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 14 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 172
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1
Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
F R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 215 FSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 65.7 bits (153), Expect = 5e-10
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY- 178
+V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR +Y
Sbjct: 6 EVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYK 65
Query: 179 IRSPVGVKTVTKIFGGRKRNGVTP 250
P+G++T I+GGR+ G P
Sbjct: 66 SPEPIGIETFRTIYGGRQNRGSAP 89
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
K V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR +YI
Sbjct: 5 KYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYI 64
Query: 182 RSPVGVKTVTKIFGGRKRNG 241
+G+ ++ +GG+ G
Sbjct: 65 NGYLGISRMSSEYGGKVDRG 84
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 61.7 bits (143), Expect = 9e-09
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 182 RSPVGVKTVTKIFGGRKRNGVTP 250
+ + +G + P
Sbjct: 74 HHDASLSGLAFHYGANMKAVTMP 96
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY+
Sbjct: 6 DVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIYLH 64
Query: 185 SPVGVKTVTKIFGGRKRNG 241
P+G+ + K +GG K +G
Sbjct: 65 GPIGINELRKDYGGGKPSG 83
Score = 39.5 bits (88), Expect = 0.040
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 265 SSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
+ G+I R A+ LE L +EKV+ GRI++ QG + LDR+
Sbjct: 92 AGGAIIRNAIHGLEKLGYLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 58.0 bits (134), Expect = 1e-07
Identities = 21/78 (26%), Positives = 47/78 (60%)
Frame = +2
Query: 2 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ YI
Sbjct: 6 KDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFYI 65
Query: 182 RSPVGVKTVTKIFGGRKR 235
+G + + +I+ G+K+
Sbjct: 66 YKKLGTRQLVRIYNGKKK 83
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/87 (31%), Positives = 49/87 (56%)
Frame = +2
Query: 5 DVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR 184
DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR +
Sbjct: 18 DVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRKVAQN 75
Query: 185 SPVGVKTVTKIFGGRKRNGVTPSLSAG 265
P+G++ + +G +KR S+ G
Sbjct: 76 EPIGIERLATEYGSKKRGSNRYSVRPG 102
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +2
Query: 17 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 196
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 197 VKTVTKIFGGRKRNG 241
+ + +GG K G
Sbjct: 63 INGLRSEYGGGKPRG 77
Score = 38.7 bits (86), Expect = 0.070
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 262 RSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 384
++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 85 KAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n=3;
Marinomonas sp. MWYL1|Rep: Peptidoglycan-binding LysM
precursor - Marinomonas sp. MWYL1
Length = 963
Score = 33.5 bits (73), Expect = 2.6
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 83 MDLVKTARFKELAPYDPDWF-YVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSL 256
+DL+ R++ + + D F + R AA+ RH +G+ TK G+ N +TP+L
Sbjct: 590 VDLIDKKRYQSITHFSFDVFGFSRGAALARHFVNALKMGLPDYTKHRSGKDTNRITPNL 648
>UniRef50_Q57WH2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 734
Score = 31.9 bits (69), Expect = 8.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 176 YIRSPVGVKTVTKIFGGRKRNGVTPSLSAGHQAVLHARLCNR 301
+ + P + ++ F +R GVTPSL+A HQA+ + NR
Sbjct: 103 WFQKPRSAEEISARFALDRRLGVTPSLAATHQALTRLQQLNR 144
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,099,912
Number of Sequences: 1657284
Number of extensions: 8103144
Number of successful extensions: 20568
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 19988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20560
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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