Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00519
         (491 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-2|CAB04689.1|  146|Caenorhabditis elegans Hypothetical pr...   103   5e-23
AF016512-1|AAB69445.1|  146|Caenorhabditis elegans ribosomal pro...   103   5e-23
U39851-2|AAF99874.1|  540|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z46812-6|CAA86848.2|  546|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z46812-5|CAA86847.2|  775|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z37093-8|CAA85469.2|  546|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z37093-7|CAA85468.2|  775|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z37092-11|CAA85461.2|  334|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z30317-3|CAA82969.1|  930|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF101307-1|AAK84528.2|  294|Caenorhabditis elegans Serpentine re...    27   9.8  

>Z81586-2|CAB04689.1|  146|Caenorhabditis elegans Hypothetical
           protein T05F1.3 protein.
          Length = 146

 Score =  103 bits (248), Expect = 5e-23
 Identities = 47/84 (55%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
           KDV+Q +  K++A  LKK+GKVKVPE  DLVK    KELAP DPDWFY R A++ RH+Y 
Sbjct: 8   KDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYF 67

Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
           R P G+    K++GG KR GV P+
Sbjct: 68  R-PAGIGAFKKVYGGNKRRGVAPN 90



 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQGRRDLDRI 384
           F  S+G+  RKA+Q LE +K VEK  DG GRIL+ QGR+DLDRI
Sbjct: 92  FQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRI 135


>AF016512-1|AAB69445.1|  146|Caenorhabditis elegans ribosomal
           protein S19 protein.
          Length = 146

 Score =  103 bits (248), Expect = 5e-23
 Identities = 47/84 (55%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 181
           KDV+Q +  K++A  LKK+GKVKVPE  DLVK    KELAP DPDWFY R A++ RH+Y 
Sbjct: 8   KDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYF 67

Query: 182 RSPVGVKTVTKIFGGRKRNGVTPS 253
           R P G+    K++GG KR GV P+
Sbjct: 68  R-PAGIGAFKKVYGGNKRRGVAPN 90



 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 256 FCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQGRRDLDRI 384
           F  S+G+  RKA+Q LE +K VEK  DG GRIL+ QGR+DLDRI
Sbjct: 92  FQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRI 135


>U39851-2|AAF99874.1|  540|Caenorhabditis elegans Hypothetical
           protein C23G10.6 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 195 ESRLSPRSLVGANVMELHLHFLQVIRQYCT 284
           E RLS + ++G  ++ LHL FL +I Q  T
Sbjct: 28  EERLSEKVIIGYKMIRLHLLFLFLINQTLT 57


>Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical
           protein F58B4.5 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +1

Query: 238 WSYTFTFCRSSGSIARKALQSLEALKLVEKVQDGGRI----LTTQGRRD 372
           WS  F   R    +  KA+   + + +    QD GR+    L+T+ RR+
Sbjct: 278 WSSNFLCTRDGEKVTLKAIIDFQTVSITTPAQDVGRLFASCLSTKDRRE 326


>Z46812-6|CAA86848.2|  546|Caenorhabditis elegans Hypothetical
           protein ZK669.1b protein.
          Length = 546

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 217 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFE 107
           D+GD   S   + V   +DGS  H++ I++I   +++
Sbjct: 495 DMGDKRKSYTTSIVIAPRDGSPDHVDQIQIIERDVYD 531


>Z46812-5|CAA86847.2|  775|Caenorhabditis elegans Hypothetical
           protein ZK669.1a protein.
          Length = 775

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 217 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFE 107
           D+GD   S   + V   +DGS  H++ I++I   +++
Sbjct: 724 DMGDKRKSYTTSIVIAPRDGSPDHVDQIQIIERDVYD 760


>Z37093-8|CAA85469.2|  546|Caenorhabditis elegans Hypothetical
           protein ZK669.1b protein.
          Length = 546

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 217 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFE 107
           D+GD   S   + V   +DGS  H++ I++I   +++
Sbjct: 495 DMGDKRKSYTTSIVIAPRDGSPDHVDQIQIIERDVYD 531


>Z37093-7|CAA85468.2|  775|Caenorhabditis elegans Hypothetical
           protein ZK669.1a protein.
          Length = 775

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 217 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFE 107
           D+GD   S   + V   +DGS  H++ I++I   +++
Sbjct: 724 DMGDKRKSYTTSIVIAPRDGSPDHVDQIQIIERDVYD 760


>Z37092-11|CAA85461.2|  334|Caenorhabditis elegans Hypothetical
           protein F44F4.13 protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 147 CVVLPSFVIFTFAHLLESRL 206
           C+ +PS +IFTF  +   RL
Sbjct: 289 CIAIPSLIIFTFRFIKNQRL 308


>Z30317-3|CAA82969.1|  930|Caenorhabditis elegans Hypothetical
           protein T16G12.6 protein.
          Length = 930

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = -3

Query: 372 VSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAESEGVTPLRLRPPKILVTVLT 196
           + S   G  A T  + LNKL     L SL C     P   + +TP     P+IL+ VL+
Sbjct: 97  IDSLKSGAYAQTT-SVLNKLSAALALFSLYCVPDLWPTPVQDLTPTLAGSPEILLKVLS 154


>AF101307-1|AAK84528.2|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein31 protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +3

Query: 105 ASKSWLRMTLIGSMCVVLPSFVIFTFAHLLESRLSPRSLVGANVME----LHLHFLQVIR 272
           A+ +W    +  +  ++L  F+    A+  + R   R+L+ A  ME    L       +R
Sbjct: 164 ATLTWFSDFIFNTGLIILTLFMNLVTAY--KGRKLSRALINAAGMEVSNVLRKREWNFVR 221

Query: 273 QYCTQGFAIVGGIEAC 320
           Q C QG +I  G  AC
Sbjct: 222 QACCQGLSIFVGQLAC 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,946,473
Number of Sequences: 27780
Number of extensions: 198043
Number of successful extensions: 526
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)