Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00518
         (607 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    60   5e-08
UniRef50_A5BEC4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 59.7 bits (138), Expect = 5e-08
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = +2

Query: 338 GRVLIPIVAPLLGFXXXXXXXXXXXXXXXXYYGNLMAGSIISKLTAAAMIAPTP 499
           G +L PIVAP+LGF                YYGN++AGS+IS+LT+AAM+APTP
Sbjct: 21  GGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_A5BEC4 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 521

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 250 ISVRSYCDLRIMGFFT-ALIVNIVGGAFFAWEGFDPNRGTSARLQRIGNNGGKHCSFS 420
           +S+  Y + +  G F   LI+ I+ G      GF  +RG S   Q+  NNG  H S S
Sbjct: 11  LSIACYIEYKTQGXFRIGLILLIIFGFXSNCLGFGISRGKSTNTQQGPNNGNSHMSKS 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,529,376
Number of Sequences: 1657284
Number of extensions: 9642091
Number of successful extensions: 19102
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19100
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)