Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00515
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   0.71 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   2.2  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   5.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   6.6  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -3

Query: 229  VQQFLSFRHGL--RFLVCGSLLPDP 161
            V Q L+ RH L  RFL C   LPDP
Sbjct: 1053 VHQQLALRHKLVERFLPCYRYLPDP 1077


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -1

Query: 189 SFAVACFPIQT*MLPDMVSKIYAFCGLKFSCLKGFDS 79
           SF++A FPI    +P  V+ +  FCGL+ + +  FD+
Sbjct: 59  SFSMA-FPINL-AVPVTVTLLLVFCGLREADVCAFDN 93


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 393 IILWHFFFVLCF*LLNDSRVRHSEVSPG 310
           ++L  F  ++C  ++N S+ +H +  PG
Sbjct: 314 LLLTAFSTIICVIVMNLSKAKHQQSLPG 341


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 69  LIFPVASDTSERITLLASFL 10
           L+F + SD+ E++TL  S L
Sbjct: 265 LVFYLPSDSGEKVTLCISIL 284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,016
Number of Sequences: 2352
Number of extensions: 8056
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)